Gene PMT9312_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1242 
Symbol 
ID3766049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1157692 
End bp1159131 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content38% 
IMG OID637797770 
Productputative nicotinamide nucleotide transhydrogenase, subunit beta 
Protein accessionYP_397737 
Protein GI78779625 
COG category[C] Energy production and conversion 
COG ID[COG1282] NAD/NADP transhydrogenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTAC CTGTAATCAT TAAATTCGTT ATTGACCTTA TAGCTGTACT TTTACTCGCT 
TTGGGAATAA AAGGGTTGTC AAAAGTAAAA TCAGCAAGGG ATGCCAATAG ATTAGCTGCA
TTCGCTATGT TTCTATCGGT AATAGGATTA CTCTCTTATT ACTTGGGGAC TTCTGGAATT
GCTATTCAGT CTTGGACTTG GATAATAATG GGATCAATAA TAGGTAGTTT GCTCGGAGCA
ATCCTCGCAA AGAAAGTACC AATGACCTCT ATGCCTGAAA CAGTTGCTTT GTTTAATGGT
TGTGGGGGAA TGTCATCACT TTTAGTAGCC TTGGGAGTAG CTATTTTCCC AATATCTAAT
AGTTTTGAAA ATGTTGATTT TTTAAAATCA CTTATTAACG AAGTTTCTAT ATCGGTTTCT
ATATTTGTAG GTGCAATAAC TTTCACTGGT TCCATTGTGG CAATGGCAAA GTTGCAGGGT
TGGTTGTCAA CGCCAGGATG GACTCAGAGC AAAGTTAGAC ATTTTGTAAA TATTGTTTTT
GCAGTTGCTT CCCTTATAGC TTTTTTTGAT CTGATAAATG GCAATACAAG TTCTATTTGG
ATTTTAGTTA TATTTTCTTC CTTATTAGGA ATTGGAGTCA CTCTGCCAAT TGGAGGAGCC
GATATGCCCG TTGTTATATC TTTATTAAAT AGTTATTCAG GTATAGCAGC AGCATCAGCA
GGTTTTGTTG TTGATAGTCA GCTTTTGATA GTGGCAGGCG CAATGGTTGG AGCAGCAGGT
CTAATACTTA CTCAAGTAAT GTGCAAAGGT ATGAATAGAT CATTGGTTTC AGTGCTTTTT
GGAGGATCTC TATCTGCTCA AAGTATGACC TCTTCTGGAT CAGGAGAATA TACTAATATA
ACTTCTTGTA GTGTTGAAGA ATGTGCATTG ACTTTAGAGG CTGCCAACAA GGTAATCATT
GTTCCTGGTT ATGGTCTCGC AGTAGCTCAA GCCCAACATA CATTAAGGGA GGTAACAAAA
AAACTAGAGC AAAATGGTAT TGAAGTTGCC TATGCAATAC ATCCTGTAGC GGGCAGGATG
CCAGGTCATA TGAATGTACT CCTAGCAGAA GCAGATGTTC CTTACGAACA ACTTAAAGAA
ATGGATGTTG TAAATCCTGA TTTTCCAGCA ACGGATGTTG TGTTGGTTTT AGGAGCAAAT
GATGTAGTTA ATCCTCAGGC GAAAAATGAT AGTTCTTCTC CTTTATACGG CATGCCAGTG
CTCGATGTGC AGGAAGCAAG AACGGTATTC GTAATTAAAA GAGGTATGAG TGCAGGTTAC
TCCGGAATAA AAAATGATTT ATTTGATCTG CCAAATACTT CGATGGTCTT TGGTGATGCA
AAGAAGGTCT TGAATGATCT TATTGGAGAG TTAAAGGATC TTGGAGTTGG GGAGAAATAA
 
Protein sequence
MNLPVIIKFV IDLIAVLLLA LGIKGLSKVK SARDANRLAA FAMFLSVIGL LSYYLGTSGI 
AIQSWTWIIM GSIIGSLLGA ILAKKVPMTS MPETVALFNG CGGMSSLLVA LGVAIFPISN
SFENVDFLKS LINEVSISVS IFVGAITFTG SIVAMAKLQG WLSTPGWTQS KVRHFVNIVF
AVASLIAFFD LINGNTSSIW ILVIFSSLLG IGVTLPIGGA DMPVVISLLN SYSGIAAASA
GFVVDSQLLI VAGAMVGAAG LILTQVMCKG MNRSLVSVLF GGSLSAQSMT SSGSGEYTNI
TSCSVEECAL TLEAANKVII VPGYGLAVAQ AQHTLREVTK KLEQNGIEVA YAIHPVAGRM
PGHMNVLLAE ADVPYEQLKE MDVVNPDFPA TDVVLVLGAN DVVNPQAKND SSSPLYGMPV
LDVQEARTVF VIKRGMSAGY SGIKNDLFDL PNTSMVFGDA KKVLNDLIGE LKDLGVGEK