Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1040 |
Symbol | |
ID | 3765843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 953254 |
End bp | 954039 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637797564 |
Product | ABC transporter |
Protein accession | YP_397535 |
Protein GI | 78779423 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.195913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTTA TTAATAACAA CTGGTGGCTG GTTCCATTAA TAATAACTAT ATTCTCCGGG ATTTTATGCC CAGCTATGGG AACTGTATTA ATCACTCATA AGAGATTATT ACAAGTTAAT TTAATCTCTC ATTGCGTGTT GCCTGGACTT GCTCTCGCAC TAGCGCTTGG AATTCACCCC TCAATTGGTG GTGTTATAAG TGGTCTTCTG GGCTCAGTAA TTGCGGAAAG TTTAACTAAT AGAAAAAGTG AAAATTATGA AGCAGTTATG AATACTATTC TCGCTGGAAT GCTTGGGTTT GGGGTCCTTA TAATCCCTTT ACTCGGAATA AGGATTGATT TGGAGGCAGT ATTATTTGGC GATTTATTGA CAGCAAATTT TGGAGATTTA CTTAGAACAA TAATTGCTTT TTTAGTATTT ATACTTTTAA TGACTTTTGG ATATGAAAAG GTTGTTTATG TGGGATTGGA TCCAGAAGGT GCATCCGCTA GTGGTATAAA CGTTTCTTTA TTAAATCTTG CTTTGAGTTT TACGACGGCA TTAGTAATTG TTAGTTCAAT GTCAGCAGTC GGAGTAATTC TTGTTATTGC TCTTCTTTCT ACCCCAACTC TATTAGGGAT TAATAAGGCT CATAGTTTAA GAATTGCAAT GATGAGGTCT TCATTTTTTG GATTATGCAT CTCACTTCTG GGCTTTATTC TCTCTATAGT CTTTAATTTG TCGCCTGGAC CTGCAATTAG TGTTATTTGT GTCGCATCTC TTTTGATTCC TAAACTTCGC AAATAA
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Protein sequence | MSFINNNWWL VPLIITIFSG ILCPAMGTVL ITHKRLLQVN LISHCVLPGL ALALALGIHP SIGGVISGLL GSVIAESLTN RKSENYEAVM NTILAGMLGF GVLIIPLLGI RIDLEAVLFG DLLTANFGDL LRTIIAFLVF ILLMTFGYEK VVYVGLDPEG ASASGINVSL LNLALSFTTA LVIVSSMSAV GVILVIALLS TPTLLGINKA HSLRIAMMRS SFFGLCISLL GFILSIVFNL SPGPAISVIC VASLLIPKLR K
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