Gene PMT9312_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1040 
Symbol 
ID3765843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp953254 
End bp954039 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content36% 
IMG OID637797564 
ProductABC transporter 
Protein accessionYP_397535 
Protein GI78779423 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.195913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTA TTAATAACAA CTGGTGGCTG GTTCCATTAA TAATAACTAT ATTCTCCGGG 
ATTTTATGCC CAGCTATGGG AACTGTATTA ATCACTCATA AGAGATTATT ACAAGTTAAT
TTAATCTCTC ATTGCGTGTT GCCTGGACTT GCTCTCGCAC TAGCGCTTGG AATTCACCCC
TCAATTGGTG GTGTTATAAG TGGTCTTCTG GGCTCAGTAA TTGCGGAAAG TTTAACTAAT
AGAAAAAGTG AAAATTATGA AGCAGTTATG AATACTATTC TCGCTGGAAT GCTTGGGTTT
GGGGTCCTTA TAATCCCTTT ACTCGGAATA AGGATTGATT TGGAGGCAGT ATTATTTGGC
GATTTATTGA CAGCAAATTT TGGAGATTTA CTTAGAACAA TAATTGCTTT TTTAGTATTT
ATACTTTTAA TGACTTTTGG ATATGAAAAG GTTGTTTATG TGGGATTGGA TCCAGAAGGT
GCATCCGCTA GTGGTATAAA CGTTTCTTTA TTAAATCTTG CTTTGAGTTT TACGACGGCA
TTAGTAATTG TTAGTTCAAT GTCAGCAGTC GGAGTAATTC TTGTTATTGC TCTTCTTTCT
ACCCCAACTC TATTAGGGAT TAATAAGGCT CATAGTTTAA GAATTGCAAT GATGAGGTCT
TCATTTTTTG GATTATGCAT CTCACTTCTG GGCTTTATTC TCTCTATAGT CTTTAATTTG
TCGCCTGGAC CTGCAATTAG TGTTATTTGT GTCGCATCTC TTTTGATTCC TAAACTTCGC
AAATAA
 
Protein sequence
MSFINNNWWL VPLIITIFSG ILCPAMGTVL ITHKRLLQVN LISHCVLPGL ALALALGIHP 
SIGGVISGLL GSVIAESLTN RKSENYEAVM NTILAGMLGF GVLIIPLLGI RIDLEAVLFG
DLLTANFGDL LRTIIAFLVF ILLMTFGYEK VVYVGLDPEG ASASGINVSL LNLALSFTTA
LVIVSSMSAV GVILVIALLS TPTLLGINKA HSLRIAMMRS SFFGLCISLL GFILSIVFNL
SPGPAISVIC VASLLIPKLR K