Gene PMT9312_0959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0959 
Symbol 
ID3765762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp890500 
End bp891486 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content29% 
IMG OID637797483 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_397455 
Protein GI78779343 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.500083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAATTA TATTCTGGGG GACACCTGAA TATTCAATTT CAAGCCTTGA TATTTTTATT 
AAATCTAAGC ACGAGGTAAT TGCAGTAGTT AGCCAACCGG ATAAGAAAAG ATCTAGGGGA 
AAAAAATTAA TATCTTCACC TGTTAAAAGC TTTGCCGAGC AAGAATCTAT AAAAATTTAT 
ACTCCGGAAA AAATTAGGGA CAACATAAAT TTTATAAATG AACTTAAATC ACTATCCTGT 
GATTTATTTA TTGTTATAGC TTATGGAAAA ATTTTACCTA AAGAGATATT AGAAATACCA 
AAATTTGGTT GTTGGAACGC ACATGCTTCA TTACTTCCAA GATGGCGTGG TGCGGCTCCA 
ATCCAATGGT CCCTAATGAA AGGTGATGAA TTTACTGGAG TAGGAATTAT GAAAATGAAT 
GAGGGACTAG ATACTGGCGA CTTATTGTTG GAAGAAAAAA TTAAAATCGA TAATAACGAT 
AATTTAATTA CACTTACGGA AAAACTTAGT ATTTTATCTG CAAAATTATT TTTAAATGCT 
ACATCTTTAC TCGAAGAAAA TATTAATAAA AATACTAATT ATCAATTAAC AAAACAAAAT 
ACTCTTGGAA GAGAAATTAC TTACGCAAGA ATGATTGAAA AATCTGACTA TAAAGTGGAT 
TGGGGTAATG AGGCAATTAA AATTTCTCGA AAAATAAAAG CATTATACCC ACGAGCAAAT 
ACAACTTTTA GAGGGAAGAA CCTAAAAATA ATCAAAATTA AAGTTTTAAG TAGTGATGAA 
ATTAATAATG AAAAATACTG TTTAATGAGC AATTATTCAA AACCAGGAAT TATTCTTGCT 
GTCTTAGAAA ATGAAGGAAT AATAATTTCA ACTAAAACTG ATCCGATTAT TTTGTTAGAA 
GCAAAACTTG AAGGCAAAAA CATATCTAGC AAAAAACAAT TAATACAACA GTTAAAGCCA 
TCATTAGGTG AATATCTCTC AAATTAA
 
Protein sequence
MRIIFWGTPE YSISSLDIFI KSKHEVIAVV SQPDKKRSRG KKLISSPVKS FAEQESIKIY 
TPEKIRDNIN FINELKSLSC DLFIVIAYGK ILPKEILEIP KFGCWNAHAS LLPRWRGAAP 
IQWSLMKGDE FTGVGIMKMN EGLDTGDLLL EEKIKIDNND NLITLTEKLS ILSAKLFLNA 
TSLLEENINK NTNYQLTKQN TLGREITYAR MIEKSDYKVD WGNEAIKISR KIKALYPRAN 
TTFRGKNLKI IKIKVLSSDE INNEKYCLMS NYSKPGIILA VLENEGIIIS TKTDPIILLE 
AKLEGKNISS KKQLIQQLKP SLGEYLSN