| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0953 |
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| Symbol | |
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| ID | 3765756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 883065 |
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| End bp | 885284 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 637797477 |
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| Product | RNA binding S1 |
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| Protein accession | YP_397449 |
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| Protein GI | 78779337 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.472283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTCTA CATCTTCTAT AATTGATAAT CTTAATAATT CAGAAGGGTT AGAATATAAA
AAATTATGCC GATCATTAAA AATAACAAAG AAATCTGATA AAGATAAATT AGATATCGCT
TTAACAGCTC TAGAAAAACT TGAAATAATA AATAAAAATG CAGTTAATGA ATATTCCTGC
ACAAAAGATA GCAATCATAT AGTCGCCAAA ATAAGATGTA GTAGCAAAGG TTATTGCTTT
GCAGTGAGGG AAAAAAACAA AGAAGATATC TACATTAAAG AAAATCTACT TAATTATGCA
TGGAATGGAG ATAAAGTTTT AGTAAGGATA ATAAAAGAGG GTTACAGAAG AAGATCACCT
GAGGGAATAG TTGACTGTAT TCTTGAAAGA TCAAATCAAA TACTTCTTTC TAAAGTTGAA
GAAATAAACA ATGATATATA TGCTATTCCT ATCGACGACA GGATACTTTC TAAAATAAAA
CTTCCAAAAG AGGATAAGAA ATACACTTAC AAACCAGAAA ATAAGAATAT AGTTAAAGTT
GAGATTGATC GATTTCCCAT AGGTCAAGAA GAAGGTTTAG GCCATGTTAT ACAAGAACTA
GAATTAAATA ATAATGAGGA ATTAGATACA GATTTTGTTT TATCTAAAAG CAATATCGTC
GAATTAGACA ATGAAAATCT TGTTAAATCT AAGAAGATAG AAAAAAGGGA AAGAATAGAC
TTAACAGATA AAAACTCTTA TTTATTCAAA AGTTGGAAGT CTGATAATTC TCCAATGCTC
CCAATAATTC AAATAGAGCA GGAAAAAAAT AAAAATACTA AACTTTGGAT ACATACAAAT
AATCTTGCAG AAATAGTAGA ACTAAATAAT AAAAAGGCCT TAGAAATACT TAATAGCTTT
GAATCATTAC CCTTATTGAA TAATTGGAAA CCCTACCATA GTGAATCCAT AAGAAATACT
TCTGAATTTA AATTAGGTGA AAAGAATGAA GCAATAAGCC TATGCTTGCA TTTAGATAGC
GATAATGAAA TAACTAAATG GTCATTTCAT CTTACTTTAG TAAAATGCAC TCTAATTATT
GGAAGTGATC ATACTGACGC CCTTCTATCA AGAAAAAGTA AAACTAGAAT AACCTCAAGG
TTACTCAAAC CAATAAAGCA ATATATCGAA GATGTGGATA AAATACTTGA AATTTCTACT
TCATTCAGAC AAAGACATCT CTTGGAAGGT AAAGTTGAAA TCCCTGCGCC ACATAATAAA
ATTGAATCCT TAGACGAATT TTTTATTCAC AACCCTGCTG AAAATTCAAA AGGATATTTT
GAACCATTAA AAAAAGAAGA TTGCCAAACA TACCTTTCTC CAATACTACA TGAAGCGAAT
TTAATATGGT TCAAACATTC AAATCAACTT GGCTTAAAAA GTGCAGGTTA CTTTTCAAAG
GGAATAGATT ACATTAATGC AAATGAACTC ATCAAATATT CAGAATTTGT TGATAATGAA
GTAGAGCTTA ATGAAGATGG TAATTTATCA TTTAGTCAAA TAATTAAGTT ATGCGGCGAT
GATAATAAAA AAAGAATCTT ACATAAACTT TTAATTAATG AATTTAAGGA AAATGAAGTA
AACCTGATTT CTAATAATGC AGATAACAAT GAATCAGAAA AACTATATAT TTCGCCATGG
ACAATTCCTG GATATGACTT CACAAATCTT ATTAACCAGT ACTGTATTTT TAATATGATA
ATAAATGGTA AGAAATCAAA GAAAAATAAT ATTAATGAAA TAAACATATT GGAAAGTGAT
TCGTTAAATT TAATAGATTG GGATATATTT AATTCGTCAA TTATAAAGAA TATAGATACA
TTATTTAATA AATTTATAAT AGATAAACTT AATGAATATA AGTGCAAAAT AAACCAATAT
AAATTAAATA TGATAAGTAT AAAAAAAGTA AGAAAGGCTG AGAATTTATT AGGCAATATT
TACAATGGGT TTATATTGTC AGTTCAAAGT TATGGTTTCT TTGTTGAGAT ATCAGATCTA
AATGTGGAAG GTCTTGTCCA CGTCAGCACC CTTAATAATG ATTGGTATGA ATATAGATCA
AGACAAAATT TATTGATTGG TAGGAAATCT AAGAAATCAT ATAAAGTTGG AGATGAAATA
GAAGTTAAAA TTATAAAAGT TGATATTCTT AAATATCAAA TTGATTTAGA GTTAACATAA
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| Protein sequence | MFSTSSIIDN LNNSEGLEYK KLCRSLKITK KSDKDKLDIA LTALEKLEII NKNAVNEYSC
TKDSNHIVAK IRCSSKGYCF AVREKNKEDI YIKENLLNYA WNGDKVLVRI IKEGYRRRSP
EGIVDCILER SNQILLSKVE EINNDIYAIP IDDRILSKIK LPKEDKKYTY KPENKNIVKV
EIDRFPIGQE EGLGHVIQEL ELNNNEELDT DFVLSKSNIV ELDNENLVKS KKIEKRERID
LTDKNSYLFK SWKSDNSPML PIIQIEQEKN KNTKLWIHTN NLAEIVELNN KKALEILNSF
ESLPLLNNWK PYHSESIRNT SEFKLGEKNE AISLCLHLDS DNEITKWSFH LTLVKCTLII
GSDHTDALLS RKSKTRITSR LLKPIKQYIE DVDKILEIST SFRQRHLLEG KVEIPAPHNK
IESLDEFFIH NPAENSKGYF EPLKKEDCQT YLSPILHEAN LIWFKHSNQL GLKSAGYFSK
GIDYINANEL IKYSEFVDNE VELNEDGNLS FSQIIKLCGD DNKKRILHKL LINEFKENEV
NLISNNADNN ESEKLYISPW TIPGYDFTNL INQYCIFNMI INGKKSKKNN INEINILESD
SLNLIDWDIF NSSIIKNIDT LFNKFIIDKL NEYKCKINQY KLNMISIKKV RKAENLLGNI
YNGFILSVQS YGFFVEISDL NVEGLVHVST LNNDWYEYRS RQNLLIGRKS KKSYKVGDEI
EVKIIKVDIL KYQIDLELT
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