Gene PMT9312_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0869 
Symbol 
ID3765670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp802953 
End bp803936 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content34% 
IMG OID637797391 
Productpyruvate dehydrogenase E1 beta subunit 
Protein accessionYP_397365 
Protein GI78779253 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.254793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGGAA CATTATTATT TAATGCTTTG AAAGAGGCAA TTGATGAAGA AATGGCAAAT 
GATGTAAATG TTTGCGTTAT GGGGGAAGAT GTTGGTCAAT ATGGAGGATC TTATAAGGTA 
ACTAAAGATT TATATGAAAA ATATGGAGAG TTAAGAGTCT TAGATACTCC AATTGCAGAG 
AATAGTTTTA CAGGCATGGC TGTGGGTGCA GCAATGACTG GCTTAAGACC AATAGTAGAA 
GGAATGAATA TGGGTTTTTT GCTTTTAGCT TTTAATCAGA TATCAAATAA TATGGGTATG 
CTTAGATATA CTAGTGGCGG AAATTATAAA ATACCAGCAG TAGTTCGAGG ACCTGGAGGA 
GTTGGTCGTC AACTTGGTGC TGAGCACAGT CAAAGACTTG AAGCATATTT TCATGCAGTT 
CCTGGCATAA AGATTGTGGC ATGTAGTACA CCCACAAATG CTAAAGGTTT AATGAAAGCA 
GCTATAAGAG ATGATAATCC AGTTCTATTT TTCGAACATG TTCTTCTATA CAATTTGTCT 
GAAGAATTAC CTGAGGGTGA TTATACTTGC GCTTTAGATC AGGCTGACGT TGTAAAAGAA 
GGGAAAGATA TTACTTTATT GACTTATTCA AGAATGAGAC ATCACTGTCT TAAAGCTGTT 
GAAGAATTAG AAAAAAAAGG AATAGATGTT GAGTTAATAG ATTTAATAAG TTTAAAACCA 
TTTGATATCG AAACCATCTC AAAATCAATA AGAAAAACAA ATAAAGTAAT TATTGTTGAA 
GAATGTATGA AGACTGGAGG TATTGGTGCA GAATTAATTG CCTTGATAAC AGAAGAGTGT 
TTTGATGATC TTGATGCCCG ACCAATTAGA TTATCTAGTC AGGATATTCC AACTCCTTAT 
AATGGAAATC TTGAGAATTT GACAATAATC CAACCACATC AAATAGTTGA AAAAGTTGAA 
CAGTTAATTA GTGGGAGTAT ATAG
 
Protein sequence
MAGTLLFNAL KEAIDEEMAN DVNVCVMGED VGQYGGSYKV TKDLYEKYGE LRVLDTPIAE 
NSFTGMAVGA AMTGLRPIVE GMNMGFLLLA FNQISNNMGM LRYTSGGNYK IPAVVRGPGG 
VGRQLGAEHS QRLEAYFHAV PGIKIVACST PTNAKGLMKA AIRDDNPVLF FEHVLLYNLS 
EELPEGDYTC ALDQADVVKE GKDITLLTYS RMRHHCLKAV EELEKKGIDV ELIDLISLKP 
FDIETISKSI RKTNKVIIVE ECMKTGGIGA ELIALITEEC FDDLDARPIR LSSQDIPTPY 
NGNLENLTII QPHQIVEKVE QLISGSI