Gene PMT9312_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0794 
Symbol 
ID3765594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp739777 
End bp740850 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content32% 
IMG OID637797315 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_397290 
Protein GI78779178 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.86487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATT ATAAGATTGT TTTATTGTCA GGCGACGGAA TTGGACCAGA GATTTCAGAA 
GTTTCAAAGA AAGTTTTAAA AAAGCTTTCA AGAAAACATA ATTTCAATAT TGAGATTATT 
GAAAAATTAT TTGGAGGGAT AGCTTATGAA AAATATGGGA CTCCTGCTCC AGATGAGACA 
CTAGATCAAT GCAAAAAATG TGATGCAGTA CTTTTAGCAT GTGTTGGAGA TATTAAATAT 
GACTCTCTTG CAAGAGAACT AAGACCAGAA AGTGGATTAC TTAAATTAAG ATCTGCCCTA 
GGCCTTTTCG CAAATATCAG GCCTGTCAAA ATAAGAAAAT CTCTTGTAAA TACAAGTACA 
TTAAAAAAAG AAATCGTTGA GAATGTAGAT CTTATTGTTG TAAGAGAATT AATAGGCGGT 
ATTTATTTTG GAAAGCCAAG AGGACATATA ACAAATACAA AAATACCGAA AGCTTTCAAC 
ACAATGGTTT ATGATTCAGC CGAAATAGAG AGAATAACTG AAATAGCAAT AAAAATTGCT 
AACCAAAGAA ATAAAAAAAT ATGTTCTGTT GATAAATCAA ACGTTCTGGA AGTTAGTCAA 
TTGTGGAGAG ATACAGTTTT AAATATCACC TTAAAAGATA AAAATATATC TTTAAGCAAT 
ATGTACGTTG ATAATGCAGC AATGCAATTG GTAAGAGATC CTAGTCAATT TGATGTGATT 
TTAACTAGCA ACTTATTTGG TGATATTTTA AGCGATTTAG CCGCGATGTT AACTGGTTCT 
ATTGGGATGC TTCCATCTGC ATCTCTAAAC AATAATGGAC CAGGTGTTTT TGAACCTGTT 
CATGGTTCAG CTCCTGATAT AGCTGGTAAA AACATAGCAA ATCCTATTGC GATGCTTTTA 
TCCGCTTCTA TGATGTTAAA AATTGGATTA AATGAAGAAG AAGCGGCGAA AAATTTAGAA 
ACTGCTGTTG ATAAAGTTTT AGCAGAAGGA TTTAGAACAG CCGATTTAGC TGATGGGTCT 
TCCGAAGTAT TATCTTGCAG TGAAATTGGA GATAAAATAA TAGATGAAAT TTAA
 
Protein sequence
MKNYKIVLLS GDGIGPEISE VSKKVLKKLS RKHNFNIEII EKLFGGIAYE KYGTPAPDET 
LDQCKKCDAV LLACVGDIKY DSLARELRPE SGLLKLRSAL GLFANIRPVK IRKSLVNTST 
LKKEIVENVD LIVVRELIGG IYFGKPRGHI TNTKIPKAFN TMVYDSAEIE RITEIAIKIA 
NQRNKKICSV DKSNVLEVSQ LWRDTVLNIT LKDKNISLSN MYVDNAAMQL VRDPSQFDVI 
LTSNLFGDIL SDLAAMLTGS IGMLPSASLN NNGPGVFEPV HGSAPDIAGK NIANPIAMLL 
SASMMLKIGL NEEEAAKNLE TAVDKVLAEG FRTADLADGS SEVLSCSEIG DKIIDEI