Gene PMT9312_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0582 
Symbol 
ID3765382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp541453 
End bp542436 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content30% 
IMG OID637797103 
Producthypothetical protein 
Protein accessionYP_397079 
Protein GI78778967 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCATATA AAAACTTATT AATAACAGGT GCGAATGGAT GTGTTGGCCA ATATTTAGTT 
GATTGGTTTT TAAAAAATAC AAAATTCAAG CTTTATCTCA TGGTAAGAGA TAAAAGTAAG
TTACCAATTG CTATTCAAGA AAATAAAAAA GTCAAGTTGA TAGTGTGCGA TATTAGAGAA
TCAAATAGAT ATAAAAAGGA AATTAGTCAA ATTAATTATC TAATACATAC TGCTACAGCT
TGGGGAGATC CAAGAAGAGC TTATGAGGTA AATATTAAAG CTTTCGAAGA ATTACTTGAA
ATGCTTGATA TTAAAAAGCT AGAAAAGATT ATTTATTTTT CAACAGCAAG CATTCTTGAT
AAAAACACAG AATTAATGAG AGAGTCATTA GTTTATGGAA CAGAATACAT ACAAACAAAA
TATGAATGTT TCCAGAGACT TAGAGAAAGC TCATTCGCAG AAAAAACATT TGCTGTTTTC
CCTACCTTGG TTTTTGGAGG AAGTCTTGGC ATAAAAAGTA AATTCCCTGT TAGCTATTTA
ACTAGTGGAT TGAAAGAAAT TGGGAAATGG CTTTGGATAG CAAGATTTTT AAAACTTGAT
TCCAAATTTC ATTTTATACA CGCAAATGAT ATTGCTCAAA TTTGTGGTTT TCTAATTAAA
AATCATAAAG AAGAGCAATA CAAAGGTTTT AGAAAATTTG TTCTAGGTCA GAGATTTATT
TCAATTGACG AGGCCATAAT TACACTTTTA AAAAGGAATA AGATGAAGAG ATATTTTGCA
ATACCCCTTT CAAAAAAAAT TCTAAAAACA TTATTAAGAA TTCTTCCCAT CCAAACTACA
CCATGGGATG GCTTCAGTAT CAAAAAATAC GACTTTAATC ATGTCCCCAT CACTAATCCT
GAGACTTTCA AACTTAAAAG TCATGCTAAA ACACTGAATG ATATTTTAAG GCTATCAAAG
TTACCAAGCT GTAATAACAA TTAA
 
Protein sequence
MAYKNLLITG ANGCVGQYLV DWFLKNTKFK LYLMVRDKSK LPIAIQENKK VKLIVCDIRE 
SNRYKKEISQ INYLIHTATA WGDPRRAYEV NIKAFEELLE MLDIKKLEKI IYFSTASILD
KNTELMRESL VYGTEYIQTK YECFQRLRES SFAEKTFAVF PTLVFGGSLG IKSKFPVSYL
TSGLKEIGKW LWIARFLKLD SKFHFIHAND IAQICGFLIK NHKEEQYKGF RKFVLGQRFI
SIDEAIITLL KRNKMKRYFA IPLSKKILKT LLRILPIQTT PWDGFSIKKY DFNHVPITNP
ETFKLKSHAK TLNDILRLSK LPSCNNN