| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0577 |
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| Symbol | |
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| ID | 3765377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 536074 |
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| End bp | 536997 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637797098 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_397074 |
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| Protein GI | 78778962 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTTCAT TAAGCGATTT TCTTGGTGAA ATAGGTCGTC ATCAACTTTT GACTCCCGAA
AGAGAACTCA CTATGGGCAG AAAAGTCCAA GAAATGGTCG TGCTTGTTAA TAGATGCCAA
GAGGCAGGTG GGAAAGGCCC TGCTTGTGAA TATTCCGAAG CTGAAAGAAA AAAGATCAAA
ATTGGTGAAA AGGCCAAAAA TGAGATGATC ACAGCCAACC TAAGATTAGT TGTCAACCTT
GCCAAGAGAT ATCAAGGAAA AGGGCTAGAA TTACTGGACT TGATTCAGGA GGGGACATTA
GGCCTTACAA GGGCTGTCGA AAAATATGAT CCCTCTAGGG GACACAGATT CTCCACCTAT
GCTTATTGGT GGATCAGGCA AGGATTAAAT AGAGCATTAT CAACTCAAAG TAGGACTATC
AGGATACCCG TTAATATCAA TGAAAAGCTC ACGAAATTAA GATCGGCTAA ATCAAAGCTA
ATGCAACTTA AAGGTATTAC ACCCAATAGT GATGAGCTAG CTGAAGAATT AAAAATAACT
AAGGAGGAAA TTGATGAACT CCTTTCTTGT GAATTAAGAA GCATCACTGT TAGTCTCCAA
GGTACTGTTA AATCAAAGTC TGATCCCTCT GAACTAGTTG ATATTCTTCC AAGTGATCAA
ACTCCTCCAA TGGAGTTAGC CGAATTAGCT GAGAGGACAG CCTCTGCTTG GAAGTTATTA
GATAAAGCAA ATTTAACTGA GAAAGAGAGA AAGATAGTAA GCCTAAGATT TGGTTTAGAC
GGTTCAAATG AGTGGAGAAC TTTAGCTGAA GTAGCAAGAC ATATGAGTTG TAGCAGGGAA
TATTGCCGAC AGGTTGTTCA ACGTGCTTTA AGAAAACTTA GAAAAGCAGG AATACAGAAT
GGCTTGGTTG ATAGCATTAG CTAA
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| Protein sequence | MSSLSDFLGE IGRHQLLTPE RELTMGRKVQ EMVVLVNRCQ EAGGKGPACE YSEAERKKIK
IGEKAKNEMI TANLRLVVNL AKRYQGKGLE LLDLIQEGTL GLTRAVEKYD PSRGHRFSTY
AYWWIRQGLN RALSTQSRTI RIPVNINEKL TKLRSAKSKL MQLKGITPNS DELAEELKIT
KEEIDELLSC ELRSITVSLQ GTVKSKSDPS ELVDILPSDQ TPPMELAELA ERTASAWKLL
DKANLTEKER KIVSLRFGLD GSNEWRTLAE VARHMSCSRE YCRQVVQRAL RKLRKAGIQN
GLVDSIS
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