Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0519 |
Symbol | |
ID | 3765318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 485328 |
End bp | 486329 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637797039 |
Product | transaldolase B |
Protein accession | YP_397016 |
Protein GI | 78778904 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.882158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAA TTTTAGAACA ATTGTCCTCA ATGACTGTTG TTGTTGCAGA TACTGGTGAT TTAGATTCGA TAAAAAAATT TCAGCCAAGG GACGCTACTA CTAATCCATC TTTAATACTA GCTGCAGCTA AGAACCCTGA TTATGTGAAA TTAATTGATA AAGCTATAGA AAGTTCAGAA AATACATTGC CCAATGGATT CTCTGAAATT GAATTAATTA AAGAAACTGT TGACCAAGTT TCAGTATTTT TTGGAAAAGA AATATTGAAA ATTATTTCAG GGCGCGTATC GACAGAAGTT GACGCAAGAC TTAGCTTTGA CACCGAAGCT ACGGTAAAAA AAGCAAGAAA ATTAATCAAT CTTTACAAAA ATTTTGGCAT TGAAAAGGAA AGAATCTTAA TTAAGATTGC CGCAACGTGG GAAGGAATTA AAGCAGCTGA AATTTTGGAA AAAGAGGGTA TTAAATGCAA CTTAACCTTA CTTTTTAACT TCTGCCAAGC GGTAACTTGT GCGAATGCAA ATATAACCTT AATTTCTCCG TTCGTTGGTC GTATATTAGA TTGGCATAAA GCAAAAACTG GTAAAACTAG TTTTATAGGT GCTGAAGACC CAGGTGTTAT TTCGGTTACG CAGATTTATA AGTATTTTAA AGAAAAAGGA TTCAAGACAG AAGTAATGGG AGCTAGTTTT AGAAATCTTG ATGAAATAAA AGAATTAGCA GGTTGCGATC TTTTAACAAT AGCACCAAAA TTTCTAGAGG AACTAAAAAG AGAAAAAGGA GTTTTGATTA GGAAATTAGA TGCAAGTACC AAAATAAATA ATTCTATTGA CTATAAATTT GAGGAAAAAG ACTTTAGATT GAGTATGTTA GAAGATCAAA TGGCCAGTGA GAAGCTTAGT GAAGGTATCA CAGGATTCAG TAAGGCTATA GAAGAATTAG AAGAACTCCT AATAGAGAGA TTATCAGAAA TGAAAAATCA TAAATTAATT TCTGCCAACT AA
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Protein sequence | MKSILEQLSS MTVVVADTGD LDSIKKFQPR DATTNPSLIL AAAKNPDYVK LIDKAIESSE NTLPNGFSEI ELIKETVDQV SVFFGKEILK IISGRVSTEV DARLSFDTEA TVKKARKLIN LYKNFGIEKE RILIKIAATW EGIKAAEILE KEGIKCNLTL LFNFCQAVTC ANANITLISP FVGRILDWHK AKTGKTSFIG AEDPGVISVT QIYKYFKEKG FKTEVMGASF RNLDEIKELA GCDLLTIAPK FLEELKREKG VLIRKLDAST KINNSIDYKF EEKDFRLSML EDQMASEKLS EGITGFSKAI EELEELLIER LSEMKNHKLI SAN
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