Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0417 |
Symbol | |
ID | 3765214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 396030 |
End bp | 396851 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637796935 |
Product | putative ABC transporter, oligopeptides |
Protein accession | YP_396914 |
Protein GI | 78778802 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGCACAA ATATCAGAAA AGCTGGATTT CTAATTGTAC TTTTTTATCT GCTTGTTGTT TTAATAATGA AATTTTTAGA GGCCAATAAT TTTTTTGGTT ATTCATTTTC AATGTTAAGC AATGATATCT TTGCCCCTCC TTCGCTTAAT CATTTTTGTG GGACAGATAG ATTAGGAAGA GATGTTTGCT TAAGAACTTT GCAAGGATCA TCCTTAGCGA TAGAAGTTGT ATTCTTAGCT ATTCTTTTTT CATTAAGTTT GGGTTTGCCA TTGGGATTAT TAAGTGGATA TTTTGGTGGT TTTTTTGATA AATGCTTATC ACTAATAATG GATACTATTT TTTCAATACC TGTAATTTTG CTTTCAGTTG TTGTGGCTTT TGTATTGGGT AAGGGTATCC TTAACGCAGC TTTGGCATTG TGTATTGTTT ACTCTCCTCA ATATTTTAGA TTAATCAGAA ATCAGACAAT ATTGGTTAAA TCCGAAACTT ATGTGGAGGC AGCTCAAGTT TCAGGAGCTG ATGTTAAAAC AATTATTTTT AAATATATTC TTCCAAATGT AATAACACCT TTGCCTATCC TGCTTACCCT AAATGCTGCG GATGCTGTTT TGGTATTGGG AAGTTTAGGA TTTTTAGGCC TTGGTGTTCC TGCAGATGTT CCTGAATGGG GCAGTGATTT AAATCTTGCT CTTGCAGCTT TACCTACAGG TATATGGTGG ACGGCTTTGT TCCCAGGTTT GGCAATGTTT TTTTTAGTTT TAGGCCTTTC TTTTATAGGG GAGGATCTTG AAGAGATTTT TGATAGTCAA AATTCCGAAT AA
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Protein sequence | MGTNIRKAGF LIVLFYLLVV LIMKFLEANN FFGYSFSMLS NDIFAPPSLN HFCGTDRLGR DVCLRTLQGS SLAIEVVFLA ILFSLSLGLP LGLLSGYFGG FFDKCLSLIM DTIFSIPVIL LSVVVAFVLG KGILNAALAL CIVYSPQYFR LIRNQTILVK SETYVEAAQV SGADVKTIIF KYILPNVITP LPILLTLNAA DAVLVLGSLG FLGLGVPADV PEWGSDLNLA LAALPTGIWW TALFPGLAMF FLVLGLSFIG EDLEEIFDSQ NSE
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