Gene PMT9312_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0417 
Symbol 
ID3765214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp396030 
End bp396851 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content34% 
IMG OID637796935 
Productputative ABC transporter, oligopeptides 
Protein accessionYP_396914 
Protein GI78778802 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCACAA ATATCAGAAA AGCTGGATTT CTAATTGTAC TTTTTTATCT GCTTGTTGTT 
TTAATAATGA AATTTTTAGA GGCCAATAAT TTTTTTGGTT ATTCATTTTC AATGTTAAGC
AATGATATCT TTGCCCCTCC TTCGCTTAAT CATTTTTGTG GGACAGATAG ATTAGGAAGA
GATGTTTGCT TAAGAACTTT GCAAGGATCA TCCTTAGCGA TAGAAGTTGT ATTCTTAGCT
ATTCTTTTTT CATTAAGTTT GGGTTTGCCA TTGGGATTAT TAAGTGGATA TTTTGGTGGT
TTTTTTGATA AATGCTTATC ACTAATAATG GATACTATTT TTTCAATACC TGTAATTTTG
CTTTCAGTTG TTGTGGCTTT TGTATTGGGT AAGGGTATCC TTAACGCAGC TTTGGCATTG
TGTATTGTTT ACTCTCCTCA ATATTTTAGA TTAATCAGAA ATCAGACAAT ATTGGTTAAA
TCCGAAACTT ATGTGGAGGC AGCTCAAGTT TCAGGAGCTG ATGTTAAAAC AATTATTTTT
AAATATATTC TTCCAAATGT AATAACACCT TTGCCTATCC TGCTTACCCT AAATGCTGCG
GATGCTGTTT TGGTATTGGG AAGTTTAGGA TTTTTAGGCC TTGGTGTTCC TGCAGATGTT
CCTGAATGGG GCAGTGATTT AAATCTTGCT CTTGCAGCTT TACCTACAGG TATATGGTGG
ACGGCTTTGT TCCCAGGTTT GGCAATGTTT TTTTTAGTTT TAGGCCTTTC TTTTATAGGG
GAGGATCTTG AAGAGATTTT TGATAGTCAA AATTCCGAAT AA
 
Protein sequence
MGTNIRKAGF LIVLFYLLVV LIMKFLEANN FFGYSFSMLS NDIFAPPSLN HFCGTDRLGR 
DVCLRTLQGS SLAIEVVFLA ILFSLSLGLP LGLLSGYFGG FFDKCLSLIM DTIFSIPVIL
LSVVVAFVLG KGILNAALAL CIVYSPQYFR LIRNQTILVK SETYVEAAQV SGADVKTIIF
KYILPNVITP LPILLTLNAA DAVLVLGSLG FLGLGVPADV PEWGSDLNLA LAALPTGIWW
TALFPGLAMF FLVLGLSFIG EDLEEIFDSQ NSE