Gene PMT9312_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0404 
Symbol 
ID3765201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp384610 
End bp385773 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content34% 
IMG OID637796922 
Productputative cystathionine gamma-synthase 
Protein accessionYP_396901 
Protein GI78778789 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATA AGACAAATAA TATCAAAAAG CCAGGTGTTA AGACCTTATC TATTCACCAT 
GGGGAAACAT TTGCAGAAGA CACGGGATGC ATTATGCCTC CTATTTTTTC TACATCTACT
TTCAAGCATG GCAATAAAGA AAGTTTCGAC TACACCAGAT CAGGAAATCC CAACTTTAAA
ATTCTAGAAA ACATACTTAA ATCAATAGAA GATTCTAAAT ACTGTACAGT TTTTGGATCT
GGAATTAGCG CGGTAACTGC AATTACATCA ACACTAAAAT CAGGCGATAA GATACTCTGC
GAATCAAATC TTTATGGTTG TACAGTGAGG ATGTTCGAAA AAATTTTCAA GAAATTTGGG
GTAGAAGTTT TATACACAGA TTTTACAAAT AAAAATAATA TTAAAAAGAT TTCAAACTTC
GCGCCAACTT TGATATGGCT AGAAAGTCCA ACTAATCCAC TTTTAAAGGT GCTTGATATT
AAGGCGATTT GTGATGAAGC GAATAAATTG CAAATACCCG TAGTTGTGGA CAACACCTTT
TCTACAGCCC TTATTCAAAA ACCTTTGGAA CTTGGCGCAA CACTATCGCT TGTAAGCACA
ACAAAATTCA TTAATGGACA TAGTGATGCA CTTGGTGGAG CAGTACTTAC AAATAATGAG
ATATGGAATA GTAAGATGCT TTTCTCTCAA AAAGCCCTGG GGCTTCAACC ATCTCCTTTT
GATAGTTGGC TCATTACTAG AGGAGTAAAA ACCCTTCCTT TAAGAATCGA ACAACAAACT
CGAAGTGCAG AATTAATTTC TGAAGAATTA GAGAATCATA AAATAATTAG TAAAGTAATT
TATCCTTTTA ATCAAAAACA CCCGCAATTT AATTTAGCAA AATCTCAAAT GATATCTGGA
GGTTCGATGA TCACCCTAAA ATTAAATTTA AATAAAGAGG ATACTTTTAA ATTATGCAAG
TCTCTCAAAT ATTTCTCGCT AGCTGAAAGC CTTGGAGGAG TTGAAAGTTT AATTTGTCAC
CCGGCAACAA TGACTCATGC TTCTGTGGAT GATAAAACGA AAAATCTACT AGGGATAGAT
GATGCCCTTG TCAGATTATC AATTGGATGT GAAGATGCAA ACGATTTAAT CTCGGATATT
TTATTTGCTT TAAATAAATT TTGA
 
Protein sequence
MGNKTNNIKK PGVKTLSIHH GETFAEDTGC IMPPIFSTST FKHGNKESFD YTRSGNPNFK 
ILENILKSIE DSKYCTVFGS GISAVTAITS TLKSGDKILC ESNLYGCTVR MFEKIFKKFG
VEVLYTDFTN KNNIKKISNF APTLIWLESP TNPLLKVLDI KAICDEANKL QIPVVVDNTF
STALIQKPLE LGATLSLVST TKFINGHSDA LGGAVLTNNE IWNSKMLFSQ KALGLQPSPF
DSWLITRGVK TLPLRIEQQT RSAELISEEL ENHKIISKVI YPFNQKHPQF NLAKSQMISG
GSMITLKLNL NKEDTFKLCK SLKYFSLAES LGGVESLICH PATMTHASVD DKTKNLLGID
DALVRLSIGC EDANDLISDI LFALNKF