Gene PMT9312_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0395 
Symbol 
ID3765192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp374947 
End bp375606 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content28% 
IMG OID637796913 
Productputative deoxyribose-phosphate aldolase 
Protein accessionYP_396892 
Protein GI78778780 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.054559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAATA TTGAATATGA ATTAAACGAG AAAATTCATG CGATTATTAT TAACCCATAC 
CTCACATGGG ATGATTTCTG TGCAAATTGC GATTTAATAA AAAAATATAA TATCAAGAAT 
ATTTCTACTT CTCTTAATTA TTTATCTGAT TTAAAAAACT GTTTAAGTAA TTACAGCGCA 
AATATAAACG CGCTCATTTC TTATCCTTTA GCAGATATGC CAGTTTCATT TATTGAAGAA 
TTAGTTTGTT TTGCAAAAGA TAAAGGGGCA AACGGAATTG AGTATATCCC AAACTTTATC 
AATTTATCCA AGAAAAATTC AGAAACTTTT GCTGCTGAAA TTGAGCAAGT TAAATTATCC 
GGATTACCAG TTACATTAAT CATAAATAAA TCAAAACTAG AAGAAAAAAT TTTGTATAAT 
GCTATAGACA TATTTCTAGA ATTAGGAATA AAAAATTTTC AATTCGGAGA CGGATTTGGT 
CCTCCAACTA CATTTAATGA TGTAGCAGAA ATTTTAAAAA TAACTGGCAA CCAAAATCAA 
ATTAAAATTG TAGGTGGTTT TAGAAAACTA AATCAAGTTA TTGATTTGTT GGATGCTGGA 
ATTAATTTCA TAGGGACTTC TAATTTTCGT GAGATATTCG AAGAAGTAAA AGTTATTTAA
 
Protein sequence
MPNIEYELNE KIHAIIINPY LTWDDFCANC DLIKKYNIKN ISTSLNYLSD LKNCLSNYSA 
NINALISYPL ADMPVSFIEE LVCFAKDKGA NGIEYIPNFI NLSKKNSETF AAEIEQVKLS 
GLPVTLIINK SKLEEKILYN AIDIFLELGI KNFQFGDGFG PPTTFNDVAE ILKITGNQNQ 
IKIVGGFRKL NQVIDLLDAG INFIGTSNFR EIFEEVKVI