Gene PMT9312_0273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0273 
Symboltgt 
ID3765060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp261241 
End bp262359 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content34% 
IMG OID637796781 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_396770 
Protein GI78778658 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTCAAT TTGAAATTAC ATCGAATTGC AGTAATACAG ATGCAAGAAC TGGTATATTT 
CATACCCCAA ATGGTCAGGT AAACACTCCA AGATTTATGC CTGTGGGTAC TTTGGGAACG
GTTAAAGGAA TTTCATCTAA GCAGTTAACC TCTACAGGAT CAGAAATGAT TCTCTCAAAT
ACCTTCCATC TTCATTTGCA ACCTGGAGAA AAACTAGTTA AAGAATCTGG TGGAATACAT
AAGTTCATGA ATTGGCCTAA GCCTATTCTT ACTGATTCAG GTGGATATCA AGTTTTTAGT
TTGGCTAAAT TAAATAATAT TTCTGATAAA GGTGTGGAAT TTAAAAATCC AAGAGATGGT
AGTCATGTAT TTTTATCACC CGAAAAAGTA ATGCAGATTC AAATGGATCT TGGCTCGGAT
GTTGCGATGG CTTTTGATCA TTGCCCTCCG CATACAGCTA ATGAAAATGA TATAGAGGAC
TCCTTACTAA GAACTCATTC TTGGTTGCAA AAATGTGTTG AGACTCATCA GAAATCAAAT
CAAGCATTAT TCGGAATAAT TCAAGGTGGT AAGTATCCTA GATTAAGAGA ATATAGCGCA
AAATTTACAA GTTCTTTTGA TCTGCCTGGA ATAGCGGTAG GGGGTGTCAG TGTTGGAGAG
GCAGTCGAAG AAATACATAG TGTAATTAAT TACATCCCGA AATTCTTACC AATAAATAAA
CCAAGATATT TAATGGGAAT TGGCTCTTTA AGAGAAATTT CTTTAGCTGT TGCTAAAGGA
TTCGATATAT TTGACTGTGT TTTGCCTACA AGACTAGGAA GACATGGGAC TGCATTTTTT
AATGATCAAA GATTGAATTT GCGAAATGCT CGATTTAAAA ATGATTTTTC TCCGATTGAT
AAAACTTGTA AATGCGAAAC CTGTAAGTCC TATTCTCGTG CATATTTGCA TCATTTAATT
AGAAATGATG AAATATTAGG TCTCACCTTA ATAAGTTTGC ATAATATTGC TCATTTAATA
AGATTTACCA ATGCCATTTC TAATGCAATT AAAGATAATT GTTTTACAAT TGATTTCGCT
CCTTGGAAAA CAGCCTCTAT TGCTCACCAT ACGTGGTAA
 
Protein sequence
MFQFEITSNC SNTDARTGIF HTPNGQVNTP RFMPVGTLGT VKGISSKQLT STGSEMILSN 
TFHLHLQPGE KLVKESGGIH KFMNWPKPIL TDSGGYQVFS LAKLNNISDK GVEFKNPRDG
SHVFLSPEKV MQIQMDLGSD VAMAFDHCPP HTANENDIED SLLRTHSWLQ KCVETHQKSN
QALFGIIQGG KYPRLREYSA KFTSSFDLPG IAVGGVSVGE AVEEIHSVIN YIPKFLPINK
PRYLMGIGSL REISLAVAKG FDIFDCVLPT RLGRHGTAFF NDQRLNLRNA RFKNDFSPID
KTCKCETCKS YSRAYLHHLI RNDEILGLTL ISLHNIAHLI RFTNAISNAI KDNCFTIDFA
PWKTASIAHH TW