Gene PMT9312_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0172 
Symbol 
ID3764957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp164451 
End bp165596 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content33% 
IMG OID637796679 
ProductnifS-like aminotransferase class-V 
Protein accessionYP_396670 
Protein GI78778558 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATCAA CTCCCATACT ACTAGACTAC CAATCATCAA CTCCTTGCTC TAAAGATGTT 
GTTGATTCTA TGAAACCTTT TTGGAGTGAG ATATTTTCTA ACCCTTCAAG CAAATCTAAT
TTGGCGGGTA TAAACGCAAG CGCTATCTTG GAAGCCTCAA GAGAAAGTAT AGAAAAAACT
TTATTTCTCC ATAATAAAAA GGTTGTCTTT ACAAGTGGGG CGACAGAATC TAATAACTTA
GCCTTAATAG GTTTTGCAAG AAATTACTAT AAAAAAACAA GGCATTATGG ACATATTATT
ACCTTAAAAA CAGAGCATAA AGCTGTATTG GAGCCCCTAA ATCAACTAAA AAAAGAGGGA
TTTATGGTTA CAGAAATCAC TCCAGAAAGA GATGGGTTGA TCTCAGAAGA AAAGTTCAAA
AAGAACATAA GAGAAGATAC ATTTATGGTG AGTGTCATGT TGGCAAATAA CGAAATAGGA
GTTATTCAGC CCATAAAGAA TATTTCAAAG ATATGTAACT CGAGAGGAAT AGCTTTTCAC
TCAGATTTTG CACAATGTTT AGGTTACATA GAGTTAAACG ATCTTTTATC AAATGTAAAT
ATGATAACGA TGAGTTCTCA TAAAATTTAT GGCCCAAAAG GGATAGGTCT TCTTTTGATT
GATGAAGAAA TTAATCTGGA ACCTTTAATT GTTGGAGGAG GGCAGGAATA TGGTCTAAGA
TCTGGCACAT TACCTCTCCC TCTAGTAGTA GGCTTTGCTA AGGCAATAGA GATAGCCGTT
CTTAATCAAA AAAAGAATGC TGAAAAATTA CTTTTGTATA GAAACAACCT TTTAAAGGGT
TTGTTAGAAA ATAATTCTGG TTTATTAATT AATGGCTCCA TAAAAAAAAG GTTACCTCAC
AATTTGAATT TGACTGTATT GGATTTAAAC GGAGCAAACT TTCATAAACT TTTAAAATCT
AAAATAATTT GTTCTAGTGG ATCAGCATGC AGTAATGGTG AACCTTCTCA CGTTTTACTC
GCCTTAGGTA GATCTTTTAA AGAAGCACAA TCTTCAATAA GGCTAAGTAT TGGATTAAGC
ACTAGTTCAA AAGATATAAA ACAAGCAATT CAAATACTTA CTAATACAAT CAAAGCATTA
CGTTAG
 
Protein sequence
MLSTPILLDY QSSTPCSKDV VDSMKPFWSE IFSNPSSKSN LAGINASAIL EASRESIEKT 
LFLHNKKVVF TSGATESNNL ALIGFARNYY KKTRHYGHII TLKTEHKAVL EPLNQLKKEG
FMVTEITPER DGLISEEKFK KNIREDTFMV SVMLANNEIG VIQPIKNISK ICNSRGIAFH
SDFAQCLGYI ELNDLLSNVN MITMSSHKIY GPKGIGLLLI DEEINLEPLI VGGGQEYGLR
SGTLPLPLVV GFAKAIEIAV LNQKKNAEKL LLYRNNLLKG LLENNSGLLI NGSIKKRLPH
NLNLTVLDLN GANFHKLLKS KIICSSGSAC SNGEPSHVLL ALGRSFKEAQ SSIRLSIGLS
TSSKDIKQAI QILTNTIKAL R