Gene PMT9312_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0109 
Symbol 
ID3764892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp110760 
End bp111410 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content30% 
IMG OID637796614 
ProductribD/ribG-like 
Protein accessionYP_396606 
Protein GI78778494 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTATCC CAAGAGTAAT AATTGTTATA GCATCTAGTC TTGATGGAAG AATTGCATTT 
CCTGAAGGTG GAGAATCGCA TCTTGGAAGC GAAGAAGATA AAAAAATGTT AAATCAAAAC 
TTATCAATGG TTGACGCCAC CATTTTCGGT TTAGGTACTT TATTAGCTCA TCAATCAACT 
TACCTAATTA AAAATCTCAA TGATAATAAC GAAGTAAAAA TATCAAAAAG CCAACCAATT 
TCTATAGTTG CTTCAAATAG CAAAAAATTT AATAGTAATT GGAAATACTT TCGTCAACCA 
ATTAGAAGAT GGCTAATAAG CTCAAGTAAA GTTGATAATT TGTCGAAGAA TGACTTCGAG 
AAACAACTCT TTTTCGAACA TTCATGGGGG AAAACTTTAA TTTCACTCAA AAAGCAAGGG 
ATAAATGATC TAGCTCTTTT AGGAGGTGCA AAACTTATAA ATTCATTTAT AAAAGAGGAT 
CTAATAACAG ATATAAAAAT TACAATAATT CCACGAATTA TTGGAGGTAG ATATACATGG 
ATCCCTCCAA AACAAACAAA TGAGATTTTT AATCTCAAAA GACTATGGGA AATAAAATCA 
ATTAAAAATT TAATGCATAA TGAAATCCAT GTGCATTACA AAAAAATTTG A
 
Protein sequence
MSIPRVIIVI ASSLDGRIAF PEGGESHLGS EEDKKMLNQN LSMVDATIFG LGTLLAHQST 
YLIKNLNDNN EVKISKSQPI SIVASNSKKF NSNWKYFRQP IRRWLISSSK VDNLSKNDFE 
KQLFFEHSWG KTLISLKKQG INDLALLGGA KLINSFIKED LITDIKITII PRIIGGRYTW 
IPPKQTNEIF NLKRLWEIKS IKNLMHNEIH VHYKKI