Gene PMT9312_0009 details

Gene Information

• Locus tag: PMT9312_0009
• Symbol: nusB
• ID: 3764790
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: +
• Start bp: 11133
• End bp: 11759
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 637796512
• Product: transcription antitermination protein NusB
• Protein accession: YP_396506
• Protein GI: 78778394
• COG category: [K] Transcription
• COG ID: [COG0781] Transcription termination factor
• TIGRFAM ID: [TIGR01951] transcription antitermination factor NusB

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAATA AATCCCTTTC TAGAGAATTA TCTTTAATTT CTCTTGGCCT TATAAAAGAT 
AAAGGGGATT TTAAATTAAG TAAATTTCAG ATAGAAGAAA TTTTTGAATC TGCTTTGGAT 
TCTTTAATAA ACCATTGCAG AGATGAGTTA GATAATTGTC AAGCTGAGTT AGAAAATGCA 
TCACAAAACA TAATAGAGAG TGAATTAAAA GAAGGGGTTG ATTCCTCTTA TGCAAATGTT 
AGAGATGACT TAAAAAAATC TTTAACAAAA ATTGAAACTG TTATGAATAC ACTCTCAATC 
ACTTTAGACT TTCCAAAATT AATAGTTTCT AGTGGTCAAG TTGATATCAG AGATGATGTG 
AATCAGAGGA TTAGTAAAAC CATTAATAAT CTTACAATTA TTGATTCTGA TATTGATCAA 
GCTATGGATG GCTGGAAATT AAAAAGATTA CCAAGAATTG ATAGAGATAT TTTGCGTTTA 
GCCTACGTGG ATATTAATTT TCTTAATACA CCTGTTGCTG TTGCTTGTGA TGAGGCTGTT 
AATTTAGCTA ATAAGTATAG TGATATGCAA GGAAGAAAAC TTATTAATGG AATTTTAAGG 
AGATTACAAA CAGTTAAATT CCAATGA 

 

Protein sequence

MYNKSLSREL SLISLGLIKD KGDFKLSKFQ IEEIFESALD SLINHCRDEL DNCQAELENA 
SQNIIESELK EGVDSSYANV RDDLKKSLTK IETVMNTLSI TLDFPKLIVS SGQVDIRDDV 
NQRISKTINN LTIIDSDIDQ AMDGWKLKRL PRIDRDILRL AYVDINFLNT PVAVACDEAV 
NLANKYSDMQ GRKLINGILR RLQTVKFQ