Gene PMN2A_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1880 
Symbol 
ID3607292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp538431 
End bp538772 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content45% 
IMG OID637688773 
Productribulose bisphosphate carboxylase, small chain 
Protein accessionYP_293071 
Protein GI72383716 
COG category[C] Energy production and conversion 
COG ID[COG4451] Ribulose bisphosphate carboxylase small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTCC AGAGCACAGT AGGTGACTAT CAAACAGTCG CCACCCTGGA AACATTCGGC 
TTCTTACCGC CGATGACCCA GGACGAAATC TACGATCAAA TCGCTTATAT CATTGCTCAG
GGTTGGAGCC CGGTTATTGA GCATGTTCAG CCAAGTGGTT CAATGCAGAC TTATTGGTCT
TATTGGAAGT TACCTTTCTT TGGCGAGAAA GATTTAAATT TGGTTGTTAG CGAGTTAGAA
GCTTGCCATA GAGCATATCC TGACCATCAC GTTCGTATCG TTGGATATGA CGCGTATACA
CAAAGTCAAG GTACTTGCTT TGTAGTTTTC CAAGGCCGCT AG
 
Protein sequence
MPFQSTVGDY QTVATLETFG FLPPMTQDEI YDQIAYIIAQ GWSPVIEHVQ PSGSMQTYWS 
YWKLPFFGEK DLNLVVSELE ACHRAYPDHH VRIVGYDAYT QSQGTCFVVF QGR