Gene PMN2A_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1822 
Symbol 
ID3607234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp481542 
End bp483128 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content34% 
IMG OID637688715 
Productputative iron ABC transporter 
Protein accessionYP_293013 
Protein GI72383658 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1178] ABC-type Fe3+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.066661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACAACA ACAGACCTGC TTCAAAGGCC TTCAAAATAG AAAAAAATAT TAATTTCGTC 
TATAATCTAA TTGGATTAAA TAATAGTCGT TACATATTAA AGTACTTAGT AGTTTTATTA
ACATTTTTTA TTTTATGGCC GTTATTTAAT CTCGTAAAAG AGGGTTTATA CGGTATTCAA
AAAGGTTCTA TTTATTTAAC TACAGCCAAT CTTAATGAAA TAAAAGGAAC ACTTTTACTG
TTGATTTTTT CTCTAACTCT AGGAGGATTT TTAGGTGTAA CAAATGGTTG GATTTTAGCC
AATTGCCATT TCAAAGGTAG AAAAGTACTT AAAGTTTGCC AACTAATTCC TTTCGCAACA
CCAGCTTATC TTTTAGCTGC TACATTCATT GACCTCGGTA GCATTTATTC CATCAGAATT
ACCGGCATGT TGTGGGGTGT AGTAATAATG GCATTTACAA CATATCCATA TGTATTTTTA
CTAAGTTCAG AAAGTTTTGA GGAAGGCGGT AGAAAACAAA TTGAAGCATG CAGAACTCTT
GGTATAGGCC CTTGGAAAAG TTTCTTTAGA ATATCTCTCC CAATAGCAAT TCCCTCAATC
ACTGCTGGAT TAGCTTTAAT GGCCATGGAA ATCATAAATG AATTAGGTGC CGTTCAACTG
TTAAATATTC CAAGTATTTC AGCTGGAATA CTTGAGAGTT GGATAGAGAA AGGTGAGCCC
TCAGGTGCCA TTGCTCTTGC CTTATTTGCT CTAATTTTAG TTTTTCTATT AGTTGCAATT
GAACGCAAAT CAAGAGAAAA AAGTAAACGA TGGATAGACG GAATAAGTAG CGTAGATGCA
CCAAAATGGG AATTAAAAGG TATAAATCTA TTCCTTGCTC AAGTTGTAAC CTTTACCCCT
CCAATTCTTA CATTGGGTAT TCCAATCACA TGGGCAATAA TAAATATTGA TCAAATAAAT
CAAGGGTTCA ATATAGATTT AGTTGGATTG ACTATTAGAA GCTTTAGCTT AGCCTTAGCT
GTTTCATTAA TAACGATATT TATATCATTG ATTTTATCAA TTTCCAAGAG GTGGCATAAT
CATCAATGGC TCAATATATT GACCTTCTTA TCCAGTATTG GCTATGCAAT TCCAGGATCT
GTTTTAGCCC TTTCTCTTCT TTCCTTTAAA GGAAGTATCT TGCAAGTCAA CATATTAAGC
TTACTAATCT GGGGTTATAG CATTCGATTC TTAGCTGTTT CAAAAGGTGG TCTTGATGCT
GGCTTTGAGA GGATCTCGCC AAATATAGAT AATGCTGCCA TAAATCTAGG GAAAAACTGG
TCGGAGGTCC TTTTTAAAAT ACATCTACCA CTTCTCAAAG GACCTATTCT GGTAGGCATC
CTTCTTGTTT TTGTAGACAC AATAAAGGAA TTACCACTAA CTTTTATATT AAGACCATTT
GATTTTGATA CGCTTTCAGT AAGAATATTC CAATATGCAG GAGATGAAAG ACTAGCAGAA
TCTATCTTAC CTTCTTTGAT AATAATATGC CTGGGATTAA TAGCCTCTTT AGCCCTAATA
CCAAGCTTAA ATAACAGAAA TAAGTAA
 
Protein sequence
MNNNRPASKA FKIEKNINFV YNLIGLNNSR YILKYLVVLL TFFILWPLFN LVKEGLYGIQ 
KGSIYLTTAN LNEIKGTLLL LIFSLTLGGF LGVTNGWILA NCHFKGRKVL KVCQLIPFAT
PAYLLAATFI DLGSIYSIRI TGMLWGVVIM AFTTYPYVFL LSSESFEEGG RKQIEACRTL
GIGPWKSFFR ISLPIAIPSI TAGLALMAME IINELGAVQL LNIPSISAGI LESWIEKGEP
SGAIALALFA LILVFLLVAI ERKSREKSKR WIDGISSVDA PKWELKGINL FLAQVVTFTP
PILTLGIPIT WAIINIDQIN QGFNIDLVGL TIRSFSLALA VSLITIFISL ILSISKRWHN
HQWLNILTFL SSIGYAIPGS VLALSLLSFK GSILQVNILS LLIWGYSIRF LAVSKGGLDA
GFERISPNID NAAINLGKNW SEVLFKIHLP LLKGPILVGI LLVFVDTIKE LPLTFILRPF
DFDTLSVRIF QYAGDERLAE SILPSLIIIC LGLIASLALI PSLNNRNK