Gene PMN2A_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1796 
Symbol 
ID3607206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp459996 
End bp460715 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content37% 
IMG OID637688687 
Productprotein secretion component, Tat family 
Protein accessionYP_292987 
Protein GI72383632 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTGG TTGATCATCT TGAAGAACTT CGTCAAAGGA TCCTAAAAAG TCTTATTGCA 
GTTCTTCTTT CATCAGGTTT TTGCTTGTTA TTTGTCAGGA AGCTTGTACA AGCATTAGAG
ATGCCAGCGG GGAAAATACA ATTTTTACAA GTAGCACCCG GTGAATTTTT ATTTACTTCA
ATAAAAGTTG CAGGTTATGG AGGGCTTACT CTCTCTCTTC CTTTTATACT TTTCCAATTT
TTAAAGTTCA TCCTTCCGGG TCTAACAAAA AAAGAAAAGC TTTTAATAGC ACCATCAGTT
GCAGGTTCAG CAATTTTATT TTTCTTAGGA ATTTTCTTTG CTTGGAAGGC TTTAATACCC
GCAGCTTTGG GATTTCTAGT AAGTTATGGT GCTGATGTGG TTGAACCACT TTGGTCAATA
GAAAAATATT TAGATTTCGT ACTTCTGCTA ATGCTCTCAA CTGGTTTAGC CTTCCAGTTA
CCAATCCTTC AATTGATTTT GGGGTTCCTA GAAATAATTT CTTGGAAAAA GATGTTATCA
GCTTGGAGAT TAGTAGTAAT GGCTTCAGCA GTTGCAGGAG CTGTTTTAAC TCCATCGACT
GATCCCATAA CCATGCTTCT TCTCTCAACA TCGATAACTT TTTTGTTTTT TGTTGGAATT
GGGTTAGTGG CCTTAACAAC AAATCTCAAA GGACAAATTC GTCCATCCTT TGATCCATAG
 
Protein sequence
MPLVDHLEEL RQRILKSLIA VLLSSGFCLL FVRKLVQALE MPAGKIQFLQ VAPGEFLFTS 
IKVAGYGGLT LSLPFILFQF LKFILPGLTK KEKLLIAPSV AGSAILFFLG IFFAWKALIP
AALGFLVSYG ADVVEPLWSI EKYLDFVLLL MLSTGLAFQL PILQLILGFL EIISWKKMLS
AWRLVVMASA VAGAVLTPST DPITMLLLST SITFLFFVGI GLVALTTNLK GQIRPSFDP