Gene PMN2A_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1621 
Symbol 
ID3607020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp289337 
End bp289957 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content35% 
IMG OID637688500 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_292812 
Protein GI72383457 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAA AGTTCCCAAA AGGTGAAATC AAATCAATAC AAGGCCGCAG TTTTACAATG 
AAAGGCGATG ATATTGATAC AGACAGAATA ATTCCTGCGA GATTTCTCAA ATGTGTAAGT
TTTTCAGCTT TAGGAGAACA AGTCTTTGCG GATGATAGAA AAGAACTAAA GGGTAATCAC
CCATTTGATC TTGATCAAAA TAAAGGGGCA AATATTCTTG TTGTCAATGA CAATTTTGGC
TGTGGTTCAA GTCGAGAGCA TGCACCTCAG GCTCTGATGA GATGGGGGAT AAGATTAATT
ATTGGGGAAA GCTTTGCTGA AATCTTCTTT GGGAATTGCC TTGCTCTCGG GATACCTTGC
CTAACAGCCT CAAAAGAAGA AATAGTTAAC TTGCAAAACC TAGTTGAAAA AAATAACAAC
CAAATCTGGG ATTGCAATCT TAAAAACCTA TCCATTTCTA ATCAAAAAGA AACTGTCAAA
CTTATTCTTG ATGAAGGACC ACACAATATG CTTTATTCAG GGAAATGGGA TGCTACATCT
CAATTACTAG ATGAAGAAGA AAAAATAAAT AAAACATTTA ATAACTTACC TTATCTGAAT
AATTTTAAAC AACAGATCTA A
 
Protein sequence
MNQKFPKGEI KSIQGRSFTM KGDDIDTDRI IPARFLKCVS FSALGEQVFA DDRKELKGNH 
PFDLDQNKGA NILVVNDNFG CGSSREHAPQ ALMRWGIRLI IGESFAEIFF GNCLALGIPC
LTASKEEIVN LQNLVEKNNN QIWDCNLKNL SISNQKETVK LILDEGPHNM LYSGKWDATS
QLLDEEEKIN KTFNNLPYLN NFKQQI