Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1621 |
Symbol | |
ID | 3607020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 289337 |
End bp | 289957 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637688500 |
Product | 3-isopropylmalate dehydratase, small subunit |
Protein accession | YP_292812 |
Protein GI | 72383457 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAA AGTTCCCAAA AGGTGAAATC AAATCAATAC AAGGCCGCAG TTTTACAATG AAAGGCGATG ATATTGATAC AGACAGAATA ATTCCTGCGA GATTTCTCAA ATGTGTAAGT TTTTCAGCTT TAGGAGAACA AGTCTTTGCG GATGATAGAA AAGAACTAAA GGGTAATCAC CCATTTGATC TTGATCAAAA TAAAGGGGCA AATATTCTTG TTGTCAATGA CAATTTTGGC TGTGGTTCAA GTCGAGAGCA TGCACCTCAG GCTCTGATGA GATGGGGGAT AAGATTAATT ATTGGGGAAA GCTTTGCTGA AATCTTCTTT GGGAATTGCC TTGCTCTCGG GATACCTTGC CTAACAGCCT CAAAAGAAGA AATAGTTAAC TTGCAAAACC TAGTTGAAAA AAATAACAAC CAAATCTGGG ATTGCAATCT TAAAAACCTA TCCATTTCTA ATCAAAAAGA AACTGTCAAA CTTATTCTTG ATGAAGGACC ACACAATATG CTTTATTCAG GGAAATGGGA TGCTACATCT CAATTACTAG ATGAAGAAGA AAAAATAAAT AAAACATTTA ATAACTTACC TTATCTGAAT AATTTTAAAC AACAGATCTA A
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Protein sequence | MNQKFPKGEI KSIQGRSFTM KGDDIDTDRI IPARFLKCVS FSALGEQVFA DDRKELKGNH PFDLDQNKGA NILVVNDNFG CGSSREHAPQ ALMRWGIRLI IGESFAEIFF GNCLALGIPC LTASKEEIVN LQNLVEKNNN QIWDCNLKNL SISNQKETVK LILDEGPHNM LYSGKWDATS QLLDEEEKIN KTFNNLPYLN NFKQQI
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