Gene PMN2A_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1518 
Symbol 
ID3606916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp192078 
End bp193256 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content37% 
IMG OID637688396 
Productputative sugar-phosphate nucleotidyl transferase 
Protein accessionYP_292709 
Protein GI72383354 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCGA TGATCCTAGC TGCTGGGAAA GGAACCCGAG TTCAGCCGAT CACGCATGTG 
ATTCCAAAGC CAATGATTCC TATCCTTCAG AAACCTGTAA TGGAGTTTTT GTTGGAACTC
CTTAAGGAGC ACGGTTTTAC TGAGGTTATG GTCAATGTTT CCCATTTAGC AGAAGAAATA
GAAAATTATT TTCGAGATGG ACAAAGATTT GGAGTCGAAA TTGCATACAG CTTTGAAGGT
CGTATTGAAG ACGGAGAATT AATTGGTGAT GCACTTGGAT CAGCGGGTGG TCTGAAAAAA
ATTCAAGATT TTCAAAAGTT TTTTGATGAT ACTTTTGTCG TCCTATGTGG AGATGCATTA
ATTGATTTGG ATTTATCTGA AGCAGTAAAA CGACATAAAG AAAAAGGTGC TTTGGCTAGT
TTGATTACTA AACGTGTCTC AAAAGATCAA GTAAGCAGTT ATGGCGTTGT TGTAACTGAT
GAAGAGGATC GAGTTAAAGC TTTTCAAGAA AAACCTTCTA TAGATAATGC GCTAGGCGAT
ACGATTAATA CTGGAATTTA TTTATTTGAG CCAGAAATTT TTAATTATAT TCCATCTGGA
AAACCCTTTG ATATTGGCTC AGATTTGTTT CCAAAATTAG TAGAGGAAGG AGCACCTTTC
TATGCTTTAC CAATGGATTT TGAGTGGGTT GATATTGGTA AAGTACCAGA TTATTGGAGA
GCAATCAGGA ATGTACTTAA AGGTGATGTT AGACAGGTTG AAATCCCAGG AAAGCAAGTA
AGACCTGGAA TCTATACTGG TTTAAATGTT GCAGCTAATT GGGATAAAAT AAATGTGAAA
GGACCTATAT ATGTTGGTGG AATGACAAGG ATTGAAGATG GTGTAACTAT CGTTGGTCCC
TCTATGATTG GTCCAAGTTG TTGTATTTGT GAAGGCGCAA CAATTGATAA TTCAATAATC
TTTGATTATT CATTAATTGG GCCAGGAGTT CAACTTGTGG AGAAGTTAGT CTTTGGTAGA
TATTGTGTTG GTAAAGAAGG AGATCACTTT GATTTACAAG AAGCTGCTTT AGATTGGTTG
ATAACTGATG CTAGAAGACA GGACTTAGGC GAACCATCAC CTCAACAAAA AGCAATGGCT
GAATTATTAG GTACTGATCT GATTGGTTCT TCTAATTAA
 
Protein sequence
MKAMILAAGK GTRVQPITHV IPKPMIPILQ KPVMEFLLEL LKEHGFTEVM VNVSHLAEEI 
ENYFRDGQRF GVEIAYSFEG RIEDGELIGD ALGSAGGLKK IQDFQKFFDD TFVVLCGDAL
IDLDLSEAVK RHKEKGALAS LITKRVSKDQ VSSYGVVVTD EEDRVKAFQE KPSIDNALGD
TINTGIYLFE PEIFNYIPSG KPFDIGSDLF PKLVEEGAPF YALPMDFEWV DIGKVPDYWR
AIRNVLKGDV RQVEIPGKQV RPGIYTGLNV AANWDKINVK GPIYVGGMTR IEDGVTIVGP
SMIGPSCCIC EGATIDNSII FDYSLIGPGV QLVEKLVFGR YCVGKEGDHF DLQEAALDWL
ITDARRQDLG EPSPQQKAMA ELLGTDLIGS SN