Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1510 |
Symbol | |
ID | 3606908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 182972 |
End bp | 184366 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637688388 |
Product | three-step phytoene desaturase / zeta-carotene desaturase |
Protein accession | YP_292701 |
Protein GI | 72383346 |
COG category | [S] Function unknown |
COG ID | [COG3349] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02731] phytoene desaturase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGTAG CAATCGCTGG AGCCGGATTG GCAGGACTCT CATGTGCAAA ATACTTAGCC GATGCTGGTC ATACGCCATT TGTTTATGAA GCACGAAACG TACTTGGCGG AAAAGTTGCT GCCTGGAAAG ATGATGATGG TGACTGGTAT GAGACTGGAT TACATATATT TTTTGGAGCT TATCCAAATA TGCTCCAGCT TTTTAAAGAA CTAGATATTG AAGATCGTCT TCAATGGAAA AGTCATTCCA TGATTTTCAA CCAACCAGAA GAACCTGGCA CATATAGCCG TTTCGACTTC CCTGATCTTC CTGCTCCAAT AAATGGAGTG GCAGCGATTT TAAGCAACAA TGACATGCTT AGCTGGCCAG AAAAAATTTC GTTTGGACTG GGACTAGTAC CAGCTATGTT GCGTGGCCAA AATTATGTAG AGGATTGTGA TAAGTACTCT TGGACGGAAT GGCTGAAAAA ACAAAATATC CCCGAAAGAG TCAATGATGA AGTTTTTATA GCCATGAGTA AGGCACTTAA TTTTATAGGT CCTGATGAAA TTTCCTCAAC AGTATTGCTA ACTGCATTAA ACCGCTTCTT ACAAGAAAAA AACGGATCAA AAATGGCATT TCTTGATGGA GCGCCACCAG AACGACTTTG TCAACCAATT GTGGATCACA TCAGAACTTT AGGAGGCGAC GTATTTTTAA ATAGCCCACT AAAAAAAATC AATTTAAAAG AAGATGGATC TGTTGAAAAT TTCTTAATAG GTAGTGCCAA AGAACCTCAG GGGAAAGAAA TCCAAGCAGA CGCATATGTC AGCGCAATGC CCGTTGATAT TTTCAAAACA ATTTTGCCCA ATGAATGGGC CTCTCAAGAT ATTTTCAGAA AACTTGAGGG ACTGAAAGGA GTCCCAGTTA TTAATATTCA TCTTTGGTTC GATCGAAAAC TTACAAATAT TGATCACCTG TTATTCAGTA GATCTCCTCT TTTAAGTGTT TATGCCGACA TGAGCATAAC TTGTAAAGAA TATGAAGATC CCAATCGTTC AATGCTTGAA TTAGTTTTTG CTCCTGCAAA AGACTGGATC GGTCGTAAAG ACGAGGAAAT AATTGATGCA ACAATGCAAG AATTGAAGAA ACTTTTTCCC ATGCATTTCT CTGGGGACAA TCAAGCTAAA TTGAGAAAAT ATAAAGTAAT AAAAACACCA AAATCAGTCT ACAAAGCTGT TCCTGGATGC CAAGATTTAA GACCTGACCA AAAGACTCCA ATAAGAAACT TTTTCTTAAC TGGTGATTAT ACAATGCAAA AATACCTCGC TTCCATGGAA GGTGCAGTCC TAAGTGGAAA AATATGTGCA GAAAAAATCC AAATCTCGAC TGACATAGGT TCTTCTACGT CTTAA
|
Protein sequence | MRVAIAGAGL AGLSCAKYLA DAGHTPFVYE ARNVLGGKVA AWKDDDGDWY ETGLHIFFGA YPNMLQLFKE LDIEDRLQWK SHSMIFNQPE EPGTYSRFDF PDLPAPINGV AAILSNNDML SWPEKISFGL GLVPAMLRGQ NYVEDCDKYS WTEWLKKQNI PERVNDEVFI AMSKALNFIG PDEISSTVLL TALNRFLQEK NGSKMAFLDG APPERLCQPI VDHIRTLGGD VFLNSPLKKI NLKEDGSVEN FLIGSAKEPQ GKEIQADAYV SAMPVDIFKT ILPNEWASQD IFRKLEGLKG VPVINIHLWF DRKLTNIDHL LFSRSPLLSV YADMSITCKE YEDPNRSMLE LVFAPAKDWI GRKDEEIIDA TMQELKKLFP MHFSGDNQAK LRKYKVIKTP KSVYKAVPGC QDLRPDQKTP IRNFFLTGDY TMQKYLASME GAVLSGKICA EKIQISTDIG SSTS
|
| |