Gene PMN2A_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1510 
Symbol 
ID3606908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp182972 
End bp184366 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content39% 
IMG OID637688388 
Productthree-step phytoene desaturase / zeta-carotene desaturase 
Protein accessionYP_292701 
Protein GI72383346 
COG category[S] Function unknown 
COG ID[COG3349] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02731] phytoene desaturase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTAG CAATCGCTGG AGCCGGATTG GCAGGACTCT CATGTGCAAA ATACTTAGCC 
GATGCTGGTC ATACGCCATT TGTTTATGAA GCACGAAACG TACTTGGCGG AAAAGTTGCT
GCCTGGAAAG ATGATGATGG TGACTGGTAT GAGACTGGAT TACATATATT TTTTGGAGCT
TATCCAAATA TGCTCCAGCT TTTTAAAGAA CTAGATATTG AAGATCGTCT TCAATGGAAA
AGTCATTCCA TGATTTTCAA CCAACCAGAA GAACCTGGCA CATATAGCCG TTTCGACTTC
CCTGATCTTC CTGCTCCAAT AAATGGAGTG GCAGCGATTT TAAGCAACAA TGACATGCTT
AGCTGGCCAG AAAAAATTTC GTTTGGACTG GGACTAGTAC CAGCTATGTT GCGTGGCCAA
AATTATGTAG AGGATTGTGA TAAGTACTCT TGGACGGAAT GGCTGAAAAA ACAAAATATC
CCCGAAAGAG TCAATGATGA AGTTTTTATA GCCATGAGTA AGGCACTTAA TTTTATAGGT
CCTGATGAAA TTTCCTCAAC AGTATTGCTA ACTGCATTAA ACCGCTTCTT ACAAGAAAAA
AACGGATCAA AAATGGCATT TCTTGATGGA GCGCCACCAG AACGACTTTG TCAACCAATT
GTGGATCACA TCAGAACTTT AGGAGGCGAC GTATTTTTAA ATAGCCCACT AAAAAAAATC
AATTTAAAAG AAGATGGATC TGTTGAAAAT TTCTTAATAG GTAGTGCCAA AGAACCTCAG
GGGAAAGAAA TCCAAGCAGA CGCATATGTC AGCGCAATGC CCGTTGATAT TTTCAAAACA
ATTTTGCCCA ATGAATGGGC CTCTCAAGAT ATTTTCAGAA AACTTGAGGG ACTGAAAGGA
GTCCCAGTTA TTAATATTCA TCTTTGGTTC GATCGAAAAC TTACAAATAT TGATCACCTG
TTATTCAGTA GATCTCCTCT TTTAAGTGTT TATGCCGACA TGAGCATAAC TTGTAAAGAA
TATGAAGATC CCAATCGTTC AATGCTTGAA TTAGTTTTTG CTCCTGCAAA AGACTGGATC
GGTCGTAAAG ACGAGGAAAT AATTGATGCA ACAATGCAAG AATTGAAGAA ACTTTTTCCC
ATGCATTTCT CTGGGGACAA TCAAGCTAAA TTGAGAAAAT ATAAAGTAAT AAAAACACCA
AAATCAGTCT ACAAAGCTGT TCCTGGATGC CAAGATTTAA GACCTGACCA AAAGACTCCA
ATAAGAAACT TTTTCTTAAC TGGTGATTAT ACAATGCAAA AATACCTCGC TTCCATGGAA
GGTGCAGTCC TAAGTGGAAA AATATGTGCA GAAAAAATCC AAATCTCGAC TGACATAGGT
TCTTCTACGT CTTAA
 
Protein sequence
MRVAIAGAGL AGLSCAKYLA DAGHTPFVYE ARNVLGGKVA AWKDDDGDWY ETGLHIFFGA 
YPNMLQLFKE LDIEDRLQWK SHSMIFNQPE EPGTYSRFDF PDLPAPINGV AAILSNNDML
SWPEKISFGL GLVPAMLRGQ NYVEDCDKYS WTEWLKKQNI PERVNDEVFI AMSKALNFIG
PDEISSTVLL TALNRFLQEK NGSKMAFLDG APPERLCQPI VDHIRTLGGD VFLNSPLKKI
NLKEDGSVEN FLIGSAKEPQ GKEIQADAYV SAMPVDIFKT ILPNEWASQD IFRKLEGLKG
VPVINIHLWF DRKLTNIDHL LFSRSPLLSV YADMSITCKE YEDPNRSMLE LVFAPAKDWI
GRKDEEIIDA TMQELKKLFP MHFSGDNQAK LRKYKVIKTP KSVYKAVPGC QDLRPDQKTP
IRNFFLTGDY TMQKYLASME GAVLSGKICA EKIQISTDIG SSTS