Gene PMN2A_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1508 
Symbol 
ID3606906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp181522 
End bp181953 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content37% 
IMG OID637688386 
ProductRNA recognition motif-containing protein 
Protein accessionYP_292699 
Protein GI72383344 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTTC GTCTTTACAT CGGTAATTTG CCGCAGAATG TCAATGTTAA AGAACTTGAA 
GCCCTCCTAA CATCTATTGG AGAAGGCATC AAATTTAAAG CTGTTTTCGA TAGAGATACC
AAAGCTTGCA GGGGATTTGG GTTCGCGAAT ATTAAAGATG AGAATGTTGC AAATGAGCTT
ATTGAAAAAT TAAATGGTCA AGAATTTAAT GGTAATAAAT TGAGGGTTGA GCGTTCTGAG
CGTAAAGATT CAAATTCCGG AAATTCAAGA CGAGGAGGGA ACGCCAATAA TGGAAATAAA
GGTTCTAGTC GTAAAGATGT TAAGAAAGTT GTACATAGCG ATGCGCCAAT GAAAGAAGCT
CCAGATCCAA GATGGGCTGG AGAACTATCA AAATTAAAAG ATCTTTTAGC TAATCAAAAA
ACTCCCGCTT AA
 
Protein sequence
MSVRLYIGNL PQNVNVKELE ALLTSIGEGI KFKAVFDRDT KACRGFGFAN IKDENVANEL 
IEKLNGQEFN GNKLRVERSE RKDSNSGNSR RGGNANNGNK GSSRKDVKKV VHSDAPMKEA
PDPRWAGELS KLKDLLANQK TPA