Gene PMN2A_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1501 
Symbol 
ID3606899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp175255 
End bp176577 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content38% 
IMG OID637688379 
Productputative glycerol-3-phosphate acyltransferase PlsX 
Protein accessionYP_292692 
Protein GI72383337 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.324319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAAAA ATCACCTAAA TAATAAAACT AATCGCTCTA AAGCAATTAG ACGATTGGTG 
ATTTGGTATC GCCGAAACTC AGCTGTAACA AGTCTTGTTG ACACTGCAAC AAGCTCAGCT
ACAGCAGCTA GTAATGTCGC AGGAACAGTT GTTTCTAACG CTGGTTCCGT TGTTACTAGT
GCTGGATCAA TTGCTAGAAG TACTTTAGAG CCATTTGTGT TTGATCCCCT TAGAAGACTC
CAAGGTGGAG AAAGTACGGA TGAAAAAAAT ACAATTCAAG ATTCTGACAG AATTTGGGTC
GCTGTCGATG GAATGGGAGG AGATTATGCA CCTGGAGCAA TTCTTGATGG GTGTTTAAAA
TCTTTGTCTC TACTTCCATT GAAAATTAAA TTTGTAGGTG AAATTGACAA AATAAAAAAA
GCAGCGCTTG AATTTGGCTT AGAAGAATCT TTAGATAAAG CAATAGATGA TGGGAATTTC
GAATTAATTG CTAGTGGCCT TTCAGTTGGT ATGGATGAAG AAGCCACTGC CGTTCGCAAA
AAAAAGGATG CGAGCATCAA TATCGCAATG AAATTAGTAA AAGATGGAAA AGCTATGGGT
GTCTATTCAG CGGGAAATTC TGGTGCAATG ATGGCCTCAG GAATTTTTAA GTTGGGACGT
CTGAAAGGAA TTGATCGTCC AGCAATTGGA GCATTATTCC CAACTAAAGA TCCTGGCCAA
CCAGTATTGG TTTTAGATGT TGGAGCAAAT ATGGATTGTA AACCAACCTA TTTGCATCAA
TTTGCTCTTC TAGGAAATAT TTATTCTCGA GATGTTTTGC AGGTTGATAA GCCAAGAATA
GGATTATTAA ATATTGGCGA AGAATCCTGT AAGGGTAATG AGCTTTCCCA AGCAACTTAC
AAACTTTTAA ATGAGGAAGA ACGTTTTTGT TTTTCTGGAA ATTGTGAAGG AAGAGATGTT
TTATCGGGTG ATTTTGATGT TGTTGTTTGT GATGGATTTA CAGGAAACGT GTTGTTGAAA
TTTTTAGAGT CAGTAGGAAG TGTTCTTTTG GGAGTTTTAA GAGCTGAGTT GCCAAGAGGA
AGAAGAGGTA AAGTTGGTTC TGCTTTTTTG AGAAATAATT TAAAACGAAT AAAGAAACGT
CTAGATCATG CAGAACATGG TGGAGCTTTA CTTCTTGGAA TTAATGGAAT TTGTGTCGTT
GGTCACGGAG GAAGTAAAGC TTTATCAGTT TTAAGTGCTT TAAGAGTTGT TCATTCAGCT
GCAAGCCATG GAGTAATGGA TGATTTAGCA GATTTGAACC AACCAGTTGT CTTAAAGGTC
TGA
 
Protein sequence
MEKNHLNNKT NRSKAIRRLV IWYRRNSAVT SLVDTATSSA TAASNVAGTV VSNAGSVVTS 
AGSIARSTLE PFVFDPLRRL QGGESTDEKN TIQDSDRIWV AVDGMGGDYA PGAILDGCLK
SLSLLPLKIK FVGEIDKIKK AALEFGLEES LDKAIDDGNF ELIASGLSVG MDEEATAVRK
KKDASINIAM KLVKDGKAMG VYSAGNSGAM MASGIFKLGR LKGIDRPAIG ALFPTKDPGQ
PVLVLDVGAN MDCKPTYLHQ FALLGNIYSR DVLQVDKPRI GLLNIGEESC KGNELSQATY
KLLNEEERFC FSGNCEGRDV LSGDFDVVVC DGFTGNVLLK FLESVGSVLL GVLRAELPRG
RRGKVGSAFL RNNLKRIKKR LDHAEHGGAL LLGINGICVV GHGGSKALSV LSALRVVHSA
ASHGVMDDLA DLNQPVVLKV