Gene PMN2A_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1446 
Symbol 
ID3606843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp126703 
End bp127875 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content33% 
IMG OID637688322 
ProductNADH dehydrogenase, FAD-containing subunit 
Protein accessionYP_292637 
Protein GI72383282 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.531912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTGA ACAATTTGAA ATCTGATCCA ATTGTTGTTG TTGGTGGTGG CTTCGGAGGA 
CTCTCCACTG TCCAAGCATT ATTAGCTCGG TCGAATGGAA TACCAATCAT TTTGATTGAT
CAAAGCCCAA GATTTCTTTT TAAGCCATTG CTTTATGAAT TATTAAGTGG TGAGCTTCAA
TTATGGGAGG TTGCACCTAA ATATTCTGCT TTAGCTTCAG AATTAGGATT TATTTTTTTA
GAAGAGTGTG TTGTTGAAGT TGATGGACTA GAGAGAAAGT TAATTACTTC ATCGGGGACT
GAAGTTACAT ACTCTCAACT TGTCATAAGC ACTGGAGTAA CAACTGATTT TTCTCTTCTC
CGAAATTTGA AAGAATATGC GTACGGTTTC TCTAGTTTGA ATGATCTCGT AAGAATTCAA
GAGTTAATAA TCTCAATCAA TAATTCTTCT AACCACTCCG ATCCTTTGAT TATCGCTGGA
GCAGGACCAA CTGGTGTTGA GCTCGCATGC AAATTATCTG ATTTAGTTAA TAACAGAGTA
GACATATATT TGGTTGATAA AGGAAATAAA ATTTTATCTA AATCCAAATC TTTTAATAGG
GAAAAAGCAA TAGATGCAAT AGCTGAGAGA AATATCAAGA TTTATTTGGA ACATTATATT
CAATCAATAA ATGAAAATAT TATAGAACTT TCTACTGTTG AGACCGAAAG AAATAATTCT
CTAAAAATTA ATTATTCTGG CTTGTTGTGG ACTGCTGGGT TAAGCCCTTG TCGGTTACAA
TTTATAGATC ATCTTTTAGA TGAAAATAAG AAGATTAAAG TAAACAAATT TTTGCAAATA
AAAGAATATC AGAATATTTT TTTTGTTGGA GATATCGTAT TTTGTGAGGA CGATCCTTTT
CCTTCTTCAG CTCAAGTAGC AATGCAGCAG GGTTTTTTAA CAGCTCAAAA TATTATTTCT
CTAAGAAAAG GCAACAAACT TAAATCATTT CAATTTGAAG ATCTTGGAGA AATGTTGAGT
CTAGGTATTG GAAATGCATC AATAACGGGT TATGGAGTTA CTTTGGCAGG ATCTCTTGCT
TTCAAAATAA GGCATTTTGC ATATTTAATG CGAATGCCAG GTTTTTCTCT ATCTTTGAAA
TCTGCAGGTT CTCGGTTATT AAGTAAAAAA TAA
 
Protein sequence
MDLNNLKSDP IVVVGGGFGG LSTVQALLAR SNGIPIILID QSPRFLFKPL LYELLSGELQ 
LWEVAPKYSA LASELGFIFL EECVVEVDGL ERKLITSSGT EVTYSQLVIS TGVTTDFSLL
RNLKEYAYGF SSLNDLVRIQ ELIISINNSS NHSDPLIIAG AGPTGVELAC KLSDLVNNRV
DIYLVDKGNK ILSKSKSFNR EKAIDAIAER NIKIYLEHYI QSINENIIEL STVETERNNS
LKINYSGLLW TAGLSPCRLQ FIDHLLDENK KIKVNKFLQI KEYQNIFFVG DIVFCEDDPF
PSSAQVAMQQ GFLTAQNIIS LRKGNKLKSF QFEDLGEMLS LGIGNASITG YGVTLAGSLA
FKIRHFAYLM RMPGFSLSLK SAGSRLLSKK