Gene PMN2A_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1312 
Symbol 
ID3606707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1823496 
End bp1824602 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content30% 
IMG OID637688188 
ProductFAD dependent oxidoreductase 
Protein accessionYP_292504 
Protein GI72383149 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGCC AAAAAACAGA AAAGAAACAC ACCACAATCT CAATTGTTGG AGGTGGGATA 
GCAGGAATTA CAACTGCCTT TCACTTAGGA AAAAAAGGTT ATCAAGTAAA TTTAATCGAC
CCAACATTAA ATTCAGAAAT AAATAATTTA AATCCAAAAA ATGGAACACA AGCTAGTTTG
GGTGTTCTCA TGGGAAATAT CTACAAAAGA TCAAAAGGAA GAGCATTTTT ACTAAGAAAA
AAAAGTATGA AATTATGGGA AGAATGGCTT ACGCAAATAA ACTATTCGGA GAAAGATTTT
ATTCTTGAAA AACCATTAAT TAAATTAGCA AGTTCAGAAA AAGAGTATCA ATCAATGGTT
GAATTAAGTC ATAATAAAAA AAATTATGGA ATTGAACTTT TAAATAAAAA TTCTTTAGAT
TTCTGGAATT CTACATTTGA GACAAGATTA ATAGGGGGAT TAATATCTCG TGAAGATGGT
CGATTAAATC CAATAAAGTT AATCAAGTCA TTAATAGAAA GTCTTGATCA AATCAAGATA
AATAAAATCT ACAAAAGTGT TATTAGCATA AGTAAAAATA GTAATTTAAA TGATAAAAGC
TGGACTATTA ACCTTGAAAA TAATCAATCT ATTAATCAAG ATTATATCAT CATTTGTTCT
GCATTAAATA CTCAAAATTT ATTAAAACCA TTAGGTCATG AAATACTTTT AGAACCAATA
TTAGGACAAG TTATTGAATT AGAATTAAAA AAAGAAATTC AGAATTGGAA AAAATGGCCT
GCAATATTAA ATTATCAATC TATAAACTTT ATACACCATG ATCCCAATCG CATGCTTATA
GGAGCAACTG TCGAAAAAGG AACTAAACCA AGCCTATTAG ATAAACAAAA AATGCTAAAT
CTGAGAAACG GTTCTCCAAA GTGGATGATC AATGCAAAAG TCAGTCATGA ATGGAGCGGA
ATAAGAGCTA GACCAACTAA TGAGGCTGCT CCCTTATTAA AACAATTAGA ACCAGGTCTA
TTAATTAATA CAGGTCACTA CAGGAATGGT GTTTTGTTAG CTCCAGCTTG TGCCGAATGG
ATTGGACTTC AAATTGAGGG CCAATAA
 
Protein sequence
MNSQKTEKKH TTISIVGGGI AGITTAFHLG KKGYQVNLID PTLNSEINNL NPKNGTQASL 
GVLMGNIYKR SKGRAFLLRK KSMKLWEEWL TQINYSEKDF ILEKPLIKLA SSEKEYQSMV
ELSHNKKNYG IELLNKNSLD FWNSTFETRL IGGLISREDG RLNPIKLIKS LIESLDQIKI
NKIYKSVISI SKNSNLNDKS WTINLENNQS INQDYIIICS ALNTQNLLKP LGHEILLEPI
LGQVIELELK KEIQNWKKWP AILNYQSINF IHHDPNRMLI GATVEKGTKP SLLDKQKMLN
LRNGSPKWMI NAKVSHEWSG IRARPTNEAA PLLKQLEPGL LINTGHYRNG VLLAPACAEW
IGLQIEGQ