| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1305 |
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| Symbol | |
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| ID | 3606700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | + |
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| Start bp | 1814366 |
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| End bp | 1815388 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637688182 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_292498 |
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| Protein GI | 72383143 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATCC CGCTGGAATC TGCCAAGGAA ATTTCTGATG TTTCATCGGG AAAATCTAAT
TCGGCAAGCA CAAGTCAAAA ACTATCTGCA TCAACTGTAA GTAGTCAAAA ATCTCGAAGT
TCTAGAAGAC AAAGTAATCG TCTAGCTACT GATGCGATAG GTTTTTATCT AACAAGTATT
GGCAGAGTCC CACTTCTGAC TCCTGCAGAA GAAATTGAGC TTGCTCATCA TGTTCAACAA
ATGAAAGATT TGTTGAATCT TCCTCTTGAA GAACGCTCTA CCCGCCAGAA GCACAAAATA
AAAATGGGTA AACGGGCAAG AGATCGCATG ATGGCTGCAA ATCTTAGACT TGTTGTAAGT
GTTGCAAAAA AATATCAAAA TCAAGGTCTC GAATTACTCG ATTTAGTTCA AGAAGGTGCC
ATTGGATTAG AAAGAGCTGT TGATAAATTT GATCCTGCAA TGGGTTATAA ATTCTCAACC
TATGCGTACT GGTGGATAAG GCAAGGGATG ACTCGTGCCA TTGATAACAG TGCTAGAACT
ATTCGACTGC CAATACACAT CAGCGAAAAA CTTTCAAAAA TGCGCCGCAT ATCGCGTGAA
TTATCTCATC GATTTGGGAG GCAACCAAAT CGACTCGAGT TGGCAAACGC AATGGGAATT
GAACCTCAAG ATCTAGAAGA TCTAGTGTCT CAAAGTGCAC CATGTGCCTC TCTTGATGCT
CATGCAAGAG GCGAAGAAGA TCGTAGTACT CTTGGAGAAT TAATTCCAGA CCCAAATTCT
GATGAACCCA TGGAAGGGAT GGATAGAAGT ATTCAAAAAG AACATCTCGG AGGCTGGTTA
TCTCAATTAA ATGAGAGAGA GCAAAAAATC ATGAGACTTC GCTTTGGACT TGATGGAGAA
GAACCACTTA CTCTAGCTGA AATTGGAAGA CAGATAAACG TTTCTAGAGA ACGTGTAAGA
CAACTTGAGG CTAAAGCAAT TTTAAAATTG AGGGTAATGA CTACTCATCA AAACGCTGCC
TAA
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| Protein sequence | MGIPLESAKE ISDVSSGKSN SASTSQKLSA STVSSQKSRS SRRQSNRLAT DAIGFYLTSI
GRVPLLTPAE EIELAHHVQQ MKDLLNLPLE ERSTRQKHKI KMGKRARDRM MAANLRLVVS
VAKKYQNQGL ELLDLVQEGA IGLERAVDKF DPAMGYKFST YAYWWIRQGM TRAIDNSART
IRLPIHISEK LSKMRRISRE LSHRFGRQPN RLELANAMGI EPQDLEDLVS QSAPCASLDA
HARGEEDRST LGELIPDPNS DEPMEGMDRS IQKEHLGGWL SQLNEREQKI MRLRFGLDGE
EPLTLAEIGR QINVSRERVR QLEAKAILKL RVMTTHQNAA
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