Gene PMN2A_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1273 
Symbol 
ID3606667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1779435 
End bp1780853 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content39% 
IMG OID637688149 
ProductDnaB replicative helicase 
Protein accessionYP_292466 
Protein GI72383111 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.539414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGCA CCCCCTCTTC AAATAACGGG GATTTTTCAA AGCAAGGTAG AGATTTTGGA 
GCTTTTAATA ATTCCAAGAT TGAGAAGCCT CGTTTTGAAG CTCAACCTGA CCAAATACCA
CCACAAAATT TAGAAGCAGA AGAATCTGTT CTTGGTGGAA TTTTATTGGA TCCTGATGCG
ATAGGACGTA TAGCTGATTT GCTACAAGTT GAAGCTTTTT ACATATCTGC TCATCGAGAA
ATATATAGAA CTGCATTAAT GCTTCATAGC CAGGGCAAGC CTACAGATTT AACAGCAATG
AGCGCTTGGC TTGCGGATAC AAATTCTTTA GAAAAAGTTG GAGGCAACAA CAGATTAGTT
GAACTTGTTG AGCGGGTTAC ATCTACAGCA TCAATCGAAC AAGTTGCTAA ATTAATTAGC
GATAAATTTC TGCGTAGACA ATTAATTAAA TCTGGAAATG ATGTAATCAA ATTAGGCTTT
GATCAAAGTC TTCCCATGGA AGAAGCTATT GATCAAGCTG AACAGAAGAT CTTTGCTATT
AGCCAAGAGC AACCATCCAA AGGTCTAACA CCCACAGCAG AAATTTTGAC AAGTACTTTC
AATGAAATAG AGAGTAGATC ACTTGGTACA TCAGTAGCAG GCATACCAGT TAATTTTTAC
GATCTGGATG CAATGACACA AGGACTGCAG CGGAGCGATC TAATAATTGT TGCAGGAAGA
CCAGCAATGG GAAAAACTTC AATTGTTCTT AATTTGGCGA AAAACGTTGC GCAACTTCAT
GACCTACCTG TTTGTGTATT CAGTCTTGAG ATGAGTAAAG AGCAACTAAC TTACAGATTG
CTATCAAGCG AGGTAGGTAT TGAGAGCAGT CGATTAAGAA CGGGACGTTT GCAACAAGAT
GAATGGCCAT TACTTGGTCA AGGTATTAAT ACGCTTGGTC AATTACCAAT CTTCATTGAT
GACAAACCAA ATTCCAGTGT TCTTGAGATG AGGTCCTTAT GTCGTCGCCT AATTGCTGAA
CAAGGTAAAG AACTGGGACT AATTGTGATT GATTATCTTC AACTAATGGA AGGTACTTCT
CCAGATAATC GAGTTCAAGA AATCTCAAGG ATTACTAGAG GCCTTAAGGG TATGGCAAGA
GAACTTAAAG TGCCTGTAAT CGCTTTATCT CAATTAAGTA GAGGAGTTGA ATCAAGAACC
AATAAAAGAC CAATGCTTAG CGATCTGCGT GAATCTGGCT CAATAGAACA GGATGCGGAC
TTGGTTCTAA TGATTTATAG GGATGAGTAT TACAATCCAG AAACTACTGA TAGAGGAATT
ACAGAAGTTA TCGTGACAAA ACACCGGAAT GGACCCGTTG GAACAGTTAA ATTACTTTTT
GAACCCCAAT TCACTAGATT TAGAAATCTT GCTGCTTAA
 
Protein sequence
MISTPSSNNG DFSKQGRDFG AFNNSKIEKP RFEAQPDQIP PQNLEAEESV LGGILLDPDA 
IGRIADLLQV EAFYISAHRE IYRTALMLHS QGKPTDLTAM SAWLADTNSL EKVGGNNRLV
ELVERVTSTA SIEQVAKLIS DKFLRRQLIK SGNDVIKLGF DQSLPMEEAI DQAEQKIFAI
SQEQPSKGLT PTAEILTSTF NEIESRSLGT SVAGIPVNFY DLDAMTQGLQ RSDLIIVAGR
PAMGKTSIVL NLAKNVAQLH DLPVCVFSLE MSKEQLTYRL LSSEVGIESS RLRTGRLQQD
EWPLLGQGIN TLGQLPIFID DKPNSSVLEM RSLCRRLIAE QGKELGLIVI DYLQLMEGTS
PDNRVQEISR ITRGLKGMAR ELKVPVIALS QLSRGVESRT NKRPMLSDLR ESGSIEQDAD
LVLMIYRDEY YNPETTDRGI TEVIVTKHRN GPVGTVKLLF EPQFTRFRNL AA