| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1267 |
|---|
| Symbol | |
|---|
| ID | 3606661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 1772418 |
|---|
| End bp | 1775324 |
|---|
| Gene Length | 2907 bp |
|---|
| Protein Length | 968 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637688143 |
|---|
| Product | glycine dehydrogenase |
|---|
| Protein accession | YP_292460 |
|---|
| Protein GI | 72383105 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
|---|
| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating)
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.561773 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAG CAGAATTAAA GGATTTCACT TTTAAGTCTC GCCATATAGG TCCAACTAAC
GAAGATGAAG CTTTAATGCT TCAACATCTT GGTTATGAGA ATGCGGAAGA ATTTATATCT
TCTGTCATTC CCAATGAAAT ATTTGATTCA GAAAACAATG GTGTTTCTAT CCCAGATGGG
TGTGATCAAA ATAAAGCGTT AACAGAAATC AATATAATTT CAAAGAAAAA TGTTGAACAT
CGTTCGCTGA TTGGTCTGGG TTATCATTCG ACTGTTATAC CTCCAGTTAT ACAAAGAAAT
GTTCTAGAAA ATCCTAATTG GTATACAGCT TATACTCCTT ATCAAGCAGA AATATCTCAA
GGCAGATTAG AAGCTTTATT TAATTTTCAG ACGTTAATAA GTGAATTAAC AGGCTTACCC
ATATCAAATG CGTCTTTACT TGATGAAGCC ACTGCGGCAG CTGAGGCAAT TAGTTTGAGT
TTGACTGTTA GAAAAAATAA AAATGCTAAT AAGTTTTTAG TAGATCAAGA AATTTTGCCT
CAAACACTTG ATGTATTAAA AACCCGATGC GAACCGCTAG GCATTTCCCT TGAGATGTTT
GATAACAATA ATTTTGAAAT CGATAAAAAT GTTTTTGGAA TTCTTATTCA GTTACCAGGA
AAAAATGGTC GTATTTGGGA CCCAACCAAA ATAATTAATG ACGCACATAA ATGTAATGCA
ATTGTGACCA TTGCAATTGA TCCTTTAGCT CAAGTTTTGA TTAAACCTAT GGGCGAATTT
GGTGCAGATA TTGTAGTTGG AAGTGCACAA AGATTTGGAG TTCCAATTGC TTTTGGTGGA
CCACATGCCG CTTTTTTTGC AACTAAAGAA ATATATAAAA GACAAATACC CGGAAGGATA
GTTGGGCAAT CAGTTGACGT AGAAGGAAAT CAAGCATTGA GGCTTGCACT TCAAACTAGA
GAGCAACATA TTCGAAGAGA TAAAGCAACA AGTAATATTT GCACAGCTCA AGTTTTACTA
GCTGTTCTTT CTTCTTTTTA TGCAGTACAT CACGGCCCAA AAGGTCTTAA GCAAATAGCA
GAAAATGTGG TCAAATATAG ATCAAATTTT GAATCCATAT TAATGAATTT AGAATACCCT
ATAGAAAAAT ATTCAGCATT TGACAGTGTT GATGTTTATT GTTCAGAAGC ATCGGAAGTT
ATTCAGCTAG CGTCTGAAGA AGGATATAAC TTAAGAGTTC TTCCTATCGG ATCAGATTTT
GAAAATGCTA AGGGTTTTGG TGTGACTTTT GATGAATTAA CATGTGATGA AGAAATTTAT
AAATTGCATC AAATACTTGC ACAAGTTAAA GGAAAAAAAA CTCATGATCT TTCCAATTTT
ATTTTTGAGA ATGCTTCACT AATTGATATT CCACTCCGAG AAAAATCTTG GCTTGAACAA
TCGGTATTTA ATCAATATCA AAGTGAGACT GATTTAATGA GATACATACA TTGCTTAGTA
TCGAAAGATT TTTCTTTAGT TCAAGGAATG ATTCCTCTTG GGAGTTGCAC AATGAAATTG
AATGCAGCTG CGGAACTTTT ACCCATTGAA TGGAGAGAGT TTTCCTCTAT TCATCCTTTT
GCTCCTCATA CTCAATTAAC TGGATTCCAC GAAATAATTA ACGACCTTGA AAATTGGCTG
TCTGCTTTAA CAGGCTTTCA GGGAGTTTCT CTTCAGCCAA ATGCAGGTTC TCAAGGAGAA
TTTGCTGGTT TGCTTGTAAT ACGTTCATGG CATCAGTCTC TGGGAGAGGG CCATAGGAAT
ATTTGCTTGA TTCCAACAAG TGCTCACGGT ACCAATCCAG CTAGTGCGGT AATGTCTGGC
TTTAAAGTTG TTTCTGTTAA ATGTGATGAA TATGGCAATG TTGATTTAGA AGACTTAAAG
AATAAATCAA AAATTCATTC AAAGAATTTG GCTGCATTGA TGGTTACCTA CCCATCAACT
CATGGAGTAT TTGAGCCAAA TATCCGTGAA ATGTGCCAAG TCATTCATCA AGAGGGTGGT
CAGGTCTATT TGGATGGAGC AAATTTGAAT GCTCAGGTAG GTATTTGCAG GCCTGGATCT
TATGGAATAG ATGTGTGCCA TTTAAATCTT CATAAAACTT TTTCCATTCC TCATGGTGGA
GGCGGCCCCG GAGTAGGTCC TATAGCTGTA GCAGATCATT TGGTTCCTTA TCTGCCTGGA
CATTCAATTA TCAAGTGCGG AGGCCAAAAG GCTATTTCGG CAGTATCTGC AGCTCCATTT
GGTAGCGCTG GAATATTGCC CATCAGTTGG ATGTACATCC GAATGATGGG TAGCGATGGG
TTACGCAAAG CGAGTTCTAT AGCAATTCTC TCTGCTAATT ATTTAGCAAA AAGACTTGAT
CCTTATTATC CAGTTTTATT TAAAGATCCC AATGGGCTAG TAGCTCATGA ATGCATATTA
GATTTACGAC CATTAAAGAG TCAGTTAGGC ATAGAAGTAG AGGATGTTGC CAAGAGATTG
ATGGATTATG GATTTCATGC ACCAACAATA AGTTGGCCTG TTGCTGGAAC TTTGATGGTT
GAACCAACAG AGAGTGAAAG TTTGCCTGAA TTAGATCGTT TTTGTGACGC GATGATAGGA
ATACGAGAAG AAATTGAACA AATAAAATTA GGAAAGATTG ATCCAATAAA TAATCCTTTA
AAACAATCTC CACATACTTT AAAAACAGTT ACCTCGGATG ATTGGGATAG ACCTTATTCT
CGTAAAGAAG CTGCTTATCC ATTGCCTGAT CAAGAAAAAT ATAAATTTTG GCCATCAGTT
TCACGTATTA ATAATGCTTA TGGAGACAGG AATTTGATTT GTAGTTGTCC TTCAGTTCAA
GATTTAGAAG ATATTAATTC TGTTTGA
|
|---|
| Protein sequence | MSKAELKDFT FKSRHIGPTN EDEALMLQHL GYENAEEFIS SVIPNEIFDS ENNGVSIPDG
CDQNKALTEI NIISKKNVEH RSLIGLGYHS TVIPPVIQRN VLENPNWYTA YTPYQAEISQ
GRLEALFNFQ TLISELTGLP ISNASLLDEA TAAAEAISLS LTVRKNKNAN KFLVDQEILP
QTLDVLKTRC EPLGISLEMF DNNNFEIDKN VFGILIQLPG KNGRIWDPTK IINDAHKCNA
IVTIAIDPLA QVLIKPMGEF GADIVVGSAQ RFGVPIAFGG PHAAFFATKE IYKRQIPGRI
VGQSVDVEGN QALRLALQTR EQHIRRDKAT SNICTAQVLL AVLSSFYAVH HGPKGLKQIA
ENVVKYRSNF ESILMNLEYP IEKYSAFDSV DVYCSEASEV IQLASEEGYN LRVLPIGSDF
ENAKGFGVTF DELTCDEEIY KLHQILAQVK GKKTHDLSNF IFENASLIDI PLREKSWLEQ
SVFNQYQSET DLMRYIHCLV SKDFSLVQGM IPLGSCTMKL NAAAELLPIE WREFSSIHPF
APHTQLTGFH EIINDLENWL SALTGFQGVS LQPNAGSQGE FAGLLVIRSW HQSLGEGHRN
ICLIPTSAHG TNPASAVMSG FKVVSVKCDE YGNVDLEDLK NKSKIHSKNL AALMVTYPST
HGVFEPNIRE MCQVIHQEGG QVYLDGANLN AQVGICRPGS YGIDVCHLNL HKTFSIPHGG
GGPGVGPIAV ADHLVPYLPG HSIIKCGGQK AISAVSAAPF GSAGILPISW MYIRMMGSDG
LRKASSIAIL SANYLAKRLD PYYPVLFKDP NGLVAHECIL DLRPLKSQLG IEVEDVAKRL
MDYGFHAPTI SWPVAGTLMV EPTESESLPE LDRFCDAMIG IREEIEQIKL GKIDPINNPL
KQSPHTLKTV TSDDWDRPYS RKEAAYPLPD QEKYKFWPSV SRINNAYGDR NLICSCPSVQ
DLEDINSV
|
|---|
| |