Gene PMN2A_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1260 
SymbolrplT 
ID3606654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1767487 
End bp1767834 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content37% 
IMG OID637688136 
Product50S ribosomal protein L20 
Protein accessionYP_292453 
Protein GI72383098 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGCG TTAAAAGAGG TAATGTTGCT AGAAAACGTA GAAACAAAAT CCTTCGCTTA 
GCGAGAGGAT TTAGAGGGGG TAATGGAACT CTTTTCCGAA CCGCAAATCA AAGAGTAATG
AAAGCCCTTT GTAACGCATA TAGAGACAGA AGAAGAAGAA AACGTGATTT CAGGAGACTT
TGGATTGCAA GAATCAATGC AGCAGCAAGA TTAAATGGAT TAAGTTACAG CAAGTTCATG
GGTGGCTTAA AGAAAGCAGA TATAAGAATT AACAGAAAAA TGCTGGCTCA ATTAGCAGTT
ATAGATCCTA AAACATTCAC AAACGTTGCA GTTAATTCAA AAAGTTAA
 
Protein sequence
MARVKRGNVA RKRRNKILRL ARGFRGGNGT LFRTANQRVM KALCNAYRDR RRRKRDFRRL 
WIARINAAAR LNGLSYSKFM GGLKKADIRI NRKMLAQLAV IDPKTFTNVA VNSKS