Gene PMN2A_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1254 
Symbol 
ID3606648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1760313 
End bp1760897 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content41% 
IMG OID637688130 
ProductATP-dependent Clp protease proteolytic subunit ClpP 
Protein accessionYP_292447 
Protein GI72383092 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTACCAA CAGTAATCGA ACAATCAGGT CAAGGTGATA GGGCATTTGA TATTTACTCT 
CGGTTACTTC GTGAAAGAAT CATCTTTCTA GGAACTGATG TAAATGATCA AGTTGCTGAT
GCATTAGTAG CTCAAATGCT TTTTTTAGAA GCTGATGATC CAGAAAAAGA TATTCAGCTG
TACGTGAACT CTCCTGGAGG GTCAGTAACT GCGGGCCTGG CTATTTACGA CACCATGCAG
CAAGTTAGTC CGGATGTCAT AACAATTTGC TACGGGCTTG CAGCAAGCAT GGGTGCTTTT
CTTCTCTCTG GAGGAACAAA AGGGAAAAGA CTTGCATTGC CAAATTCGAG AATAATGATT
CATCAACCTC TTGGTGGAGC TCAAGGTCAA GCTGTCGAAA TTGAAATTCA AGCCAAAGAA
ATTCTCTATT TAAAAGAGAC TCTTAATTCA CTTTTGGCTG AGCATACTGG ACAAAATATT
CAAAAAATTT CAGAAGACAC TGATCGAGAC CACTTTCTTT CTCCCCAAGA AGCGGTTGAA
TATGGCCTGA TCGACAAAGT GGTTTCTAAT CTCAACTCCA TATGA
 
Protein sequence
MLPTVIEQSG QGDRAFDIYS RLLRERIIFL GTDVNDQVAD ALVAQMLFLE ADDPEKDIQL 
YVNSPGGSVT AGLAIYDTMQ QVSPDVITIC YGLAASMGAF LLSGGTKGKR LALPNSRIMI
HQPLGGAQGQ AVEIEIQAKE ILYLKETLNS LLAEHTGQNI QKISEDTDRD HFLSPQEAVE
YGLIDKVVSN LNSI