| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1234 |
|---|
| Symbol | |
|---|
| ID | 3606627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 1735016 |
|---|
| End bp | 1735843 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 637688109 |
|---|
| Product | putative dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | YP_292427 |
|---|
| Protein GI | 72383072 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.137269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTG CAATAATTGG ACCCTCTGGA ATGTTGGGCA AGGTTGTATT CAATTATTTT
CTTATGTTTG GTAATGACAT TCATTTAATA TTTCCGGTAA AATATAATTT AGAAAATAAA
AACGAATTTA TAAGTTCATT AGAAAACGCT GACTTTGTTA TAAATTGTGC TGGATCTATT
CCTCAAAAGA TGCCTAATTA TACAAATGTA AACACAAAAA TAGATTACTT TAAAATCAAT
TATTTATTAC CAGAATTACT GCTTGAAAAT AACTTTAGAG TAATACATCC CTGTACAGAT
TGTGTTTACA AGGGAAATCC AAACTTAGCT CCTTATGGGC TAGATTCAAA TTATGATTGT
GATAGTCTAT ATGGTAAGAG TAAAGCATGT TTATATTCCA GAAAAACTTA TCAAATTCAT
ATTGATCTCA TAAGAGTTAT AAGAGCTTCC ATAATAGCTT CTGATCAGTC AAATAAATCA
TTATATTCAT GGACATTATC TAGGATCAAA TCATCTAATT TAATATATGG TTATGTTAAT
CATTTTTGGA ATGGTATAAC TGCTTTAAAA TGGGCAGAAA TAGCTTTTAA AATAATTAAT
AATTTTGATT CATTCCCTCC AATATCTGTA TATGGGACCA ATACTATATC TAAATACGAG
CTAATTAAAT ATATACTAAT TCTTAATAAA ATTTCCCCAG AAAAATATCT CAAACCAATA
AAAGCAACTC ATACTGTAAA TAAATCGTTA ATCCTTCATG AAAACAACTT CGGTGATATT
TATAACTTAT TAATAGAATT GAAAGAATTT GAGGATTTGA TTAATTAG
|
|---|
| Protein sequence | MKIAIIGPSG MLGKVVFNYF LMFGNDIHLI FPVKYNLENK NEFISSLENA DFVINCAGSI
PQKMPNYTNV NTKIDYFKIN YLLPELLLEN NFRVIHPCTD CVYKGNPNLA PYGLDSNYDC
DSLYGKSKAC LYSRKTYQIH IDLIRVIRAS IIASDQSNKS LYSWTLSRIK SSNLIYGYVN
HFWNGITALK WAEIAFKIIN NFDSFPPISV YGTNTISKYE LIKYILILNK ISPEKYLKPI
KATHTVNKSL ILHENNFGDI YNLLIELKEF EDLIN
|
|---|
| |