Gene PMN2A_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1122 
SymbolrplP 
ID3606510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1612628 
End bp1613113 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content43% 
IMG OID637687993 
Product50S ribosomal protein L16 
Protein accessionYP_292315 
Protein GI72382960 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0197] Ribosomal protein L16/L10E 
TIGRFAM ID[TIGR01164] ribosomal protein L16, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGCC CAAAAAGAAC CAAATTTCGT AAACAACAAA GAGGCCGTAT GCGCGGCGTT 
GCCACTAGAG GCAACAAAAT CGCTTTTGGT CAGTTTGCAT TGCAAGCTCA AGACTGTGGA
TGGGTCACCT CAAGGCAAAT CGAGGCAAGT CGACGAGCAA TGACTCGTTA TGTCAAAAGG
GGAGGACAGA TTTGGATTCG TATTTTCCCA GATAAGCCAG TGACAATGAG GCCTGCTGAA
ACAAGAATGG GATCTGGTAA AGGTAATCCA GAATTTTGGG TTGCAGTTGT CAAACCTGGT
CGAATCTTGT TTGAAATGGG CGGAGACGAA ATTACAGAGG CAATTGCAAA AGAGGCAATG
CGACTTGCTC AATACAAGCT GCCTGTTAAA ACAAAATTTA TTTCCCTAGA TGAAGATCTC
AATAAGGGAA ATTATAAACC TGCTAAAACG CCAGTTACAG CAGATGATTC GGAGTCATCA
TCATGA
 
Protein sequence
MLSPKRTKFR KQQRGRMRGV ATRGNKIAFG QFALQAQDCG WVTSRQIEAS RRAMTRYVKR 
GGQIWIRIFP DKPVTMRPAE TRMGSGKGNP EFWVAVVKPG RILFEMGGDE ITEAIAKEAM
RLAQYKLPVK TKFISLDEDL NKGNYKPAKT PVTADDSESS S