Gene PMN2A_0805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0805 
Symbol 
ID3606184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1306571 
End bp1307719 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content38% 
IMG OID637687669 
Productputative inner membrane protein translocase component YidC 
Protein accessionYP_291999 
Protein GI72382644 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.792706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGGGT ACATCTCTGA CAATCTACTT ATCCCGATCC TAGATTTTTT CTACGGATTA 
GTTCCAAGCT ATGGACTAGC GATTGTCGCA TTAACTATAG TTATCCGCCT AGCACTTTTT
CCTCTTAGCG CTGGCTCCAT TAGAAGTGCA AGAAGGATGA AGATAGCTCA ACCTGTCATG
CAAAAAAGAC AAGCTGAGAT AAAAAGCCGC TATGCAAGCA ATCCTCAAAA GCAACAAGAA
GAATTAGGCA AATTAATGGG TGAATTTGGA AGTCCCTTAG CTGGTTGCCT TCCTCTGATT
GTTCAAATGC CAATATTATT CGCATTATTC GCAACTCTAA GAGGATCACC TTTTGCTGAT
GTACCTTATC TTGTCAATAT CAAAGTTCTT CCATCAGACC AAATAGCCGC TGTAGAGCCC
AAACCTTTCA AGAGCGCAAA ACACTCCATA TTCATAACTG AAAAGAATCA TTTCCCTGTT
ATCGCAGCTC TTCCGGGAGG TACAAAAATC GGTTCAGGTG ATTCAGTTAA AATCAATCTG
CAAACCGTGA ATGGAGATTC ATATGTAAAC GAATTGCAGA AATATGAAAA TGGATCGAAA
TTTTCTCCTT CTTGGAAAGT CACGAAAGGG GAAGACATCG TAAAAGTCTC TTCTGATGGG
ACTGTGAATG CACTTAATCC TGGAGATGCC ACCGTAGAAG CGAAGATCCC TGGTTTAGCA
GCGAAAAGCG GATTCTTGTT TATAAAAGCA TTAGGAAATG TTGGTTTTTA TGTAGATGGC
TCAATTCATT GGGATATTGC AATTTTAGTA GCAGGTTTTG GTTTAACACT CGTTATTTCT
CAAGTGCTCT CTGGAAGAGG AATGCCTGTA AATAAACAAC AATCCACAGC GAATAAAATC
ACACCGGTAA TGATTACTGG AATGTTTTTA TTCTTCCCTT TGCCTGCTGG TGTTTTGCTT
TATATGGTCA TTGCAAATAT TTTTCAAGGG TTACAAACAT TTCTCCTTAG CAGAGAATCC
CTACCAGATA ATTTGCAAAA AATACTTGAT GATCAACTAA ACCAGCAAGA TAAATCAACT
GTTTCTATTG CTTCAGAAGT AATTTCTGAT TCCGATAGAT TACCCTTTGA ACCAAAAAGT
AATAAATAA
 
Protein sequence
MIGYISDNLL IPILDFFYGL VPSYGLAIVA LTIVIRLALF PLSAGSIRSA RRMKIAQPVM 
QKRQAEIKSR YASNPQKQQE ELGKLMGEFG SPLAGCLPLI VQMPILFALF ATLRGSPFAD
VPYLVNIKVL PSDQIAAVEP KPFKSAKHSI FITEKNHFPV IAALPGGTKI GSGDSVKINL
QTVNGDSYVN ELQKYENGSK FSPSWKVTKG EDIVKVSSDG TVNALNPGDA TVEAKIPGLA
AKSGFLFIKA LGNVGFYVDG SIHWDIAILV AGFGLTLVIS QVLSGRGMPV NKQQSTANKI
TPVMITGMFL FFPLPAGVLL YMVIANIFQG LQTFLLSRES LPDNLQKILD DQLNQQDKST
VSIASEVISD SDRLPFEPKS NK