Gene PMN2A_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0612 
Symbol 
ID3605987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp1100800 
End bp1101834 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content35% 
IMG OID637687472 
Productamino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine 
Protein accessionYP_291806 
Protein GI72382451 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.592334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGGAA TTTATACAAG TTCATTAATA ATTTTCTTCA AGAATGCAAG AAAAACATTG 
TTTTCAAATT TATTCAATAC AATTATTACT TTGCTCATTA TATTATTTCT TAGCGTAGCT 
TGTTTTAATA CTTTTGAATG GCTCATATTT AAGGCTAATT GGAAAGTTGT AATATCAAAT 
CTCCCTTTAT ACGCATTTGG TAGTTTTCCA TCTAATGAAC AATGGAGACC TGCTACTTGG 
ATCATCAGTC TTCTTTCACT CAGTATCTTT ACTCTTTATG GTCCTGAGTG GAAATGGCTA 
CGTAAACACC TACTAATACT GTGGGTAGGA ACAATACCAT TGGGTCTATA TTTACTTTAT 
GGTGGAATTG GCTTATCGCC TATAATGAGT AGACAATGGG GTGGATTAAC TCTAACTATA 
CTGCTAACTG TTTGTAGCTC GTTATTATCA TTACCAATTG GAATAATTTT AGCACTATGT 
CGACATAGTT CATTACCAAT AATTCAAAAG CTAAGTTCAA TCTTTATAGA TGTTATGAGA 
GCAATACCGC TTATTGCAGT GCTTTTCTTT GGTCAACTAC TAATACCTTT ATTTCTCCCA 
GTTGAAATAG AAATTGATCG TGTTTGGAGA GCTATCTTTG CGTTTACGCT ATTTGTCTCA 
GCGTACATAG CGGAAGACAT TCGTGGCGGA CTACAGTCAA TTCCCAACAC TCAAATAGAG 
GCAGCAAATA GTCTTGGCCT TAATCAATAC CAAATCATAC AATTCATATT AATTCCTCAA 
GCTTTACGCA TTGCATTACC TGCTCTCACA AATCAATCCA TTGGACTTTT TCAAAATACA 
TCGTTAATGG CTATTTTAGG GTTAGTGGAG TTACTAGGCA TAGGCAGAAG TATCCTGGCT 
AATCCAGAAT TTATTGGTCA ATATATTGAA GTTTATGTTT GGCTAGCGTG TGTCTATTGG 
ATCGTTTGTA CAATCATGGC TGTTCTTGCA AGACATCTTG AACAAAGAAT GACCATTAAT 
CAAGCTAATT TCTAA
 
Protein sequence
MFGIYTSSLI IFFKNARKTL FSNLFNTIIT LLIILFLSVA CFNTFEWLIF KANWKVVISN 
LPLYAFGSFP SNEQWRPATW IISLLSLSIF TLYGPEWKWL RKHLLILWVG TIPLGLYLLY 
GGIGLSPIMS RQWGGLTLTI LLTVCSSLLS LPIGIILALC RHSSLPIIQK LSSIFIDVMR 
AIPLIAVLFF GQLLIPLFLP VEIEIDRVWR AIFAFTLFVS AYIAEDIRGG LQSIPNTQIE 
AANSLGLNQY QIIQFILIPQ ALRIALPALT NQSIGLFQNT SLMAILGLVE LLGIGRSILA 
NPEFIGQYIE VYVWLACVYW IVCTIMAVLA RHLEQRMTIN QANF