Gene PMN2A_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0538 
Symbol 
ID3605913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1041899 
End bp1043593 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content43% 
IMG OID637687398 
Producthypothetical protein 
Protein accessionYP_291732 
Protein GI72382377 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTA CTGAAGCTAT GCCGAAAACA AGAACTTTTT CTGAGTTTGC GAAACAGGCT 
GACTACTCAC TCATGGATTC ACTCAAAGCT GACCCTCAGG CAACTGACGA TGGTGACGAC
CACCTAACAC GAGAAGTCTT TTCTGGTCAC TATGTACCTG TCACTCCAAC AGCGATTTCA
AAGCCGGAAT ATGTCACGCA CAGTAAAACA TTATTTAACG AATTAGGCCT GAGTCAAGAA
CTTGCTCTAG ATGAACTTTT TCGTCGTCTA TTTTCAGGCG ATATAAGCGT TGCAACAGCA
CCCATGCGAC CAGTTGGTTG GGCTACTGGT TACGCACTAT CGATCTATGG AACTGAATAT
ACTCAGCAGT GTCCATTTGG GACAGGTAAC GGCTATGGAG ATGGTAGAGC AATTTCAGTA
TTTGAAGGTC TATTTAATGG CAAAAGATGG GAGATGCAAC TTAAGGGAGG AGGGCCTACA
CCATACTGCA GAGGAGCTGA CGGACGAGCA GTGCTACGTT CAAGTGTTCG TGAGTTTTTG
GCGCAGGATT ATATGCAGTC ACTTGGAGTA CCAACATCAC GATCTCTCAC ACTATATGCC
TCTAGATCTG AAACAGTACG CAGACCTTGG TATACAAAAG ACTCAAATTC AATCAATCCA
GACATATTGG TAGAGACCCC AGCCGCAATC TCAACACGAG TTGCACCATC ATTCTTACGG
GTTGGTCAGA TAGAACTCTT TGCACGTCGA GTACGCAACA ATGAGCATCA AGATGCAATG
AAAGAGCTCG AGATGATTGT GAAGCACTTA ATCGTAAGAA ATTATAAGAA AGAAATTGAT
CCGACCCTTA GCTTTAGCAA TCAAGTCGTT GAGCTCGCAA ATTCATTCCG AGAACGACTC
ACATCATTAG TAGCCAATTG GATGCGGATC GGCTATTGCC AAGGTAATTT CAACAGTGAC
AACTGTGCTG CAGGTGGTTT CACCCTCGAT TACGGTCCAT TTGGATTTTG CGAACTCTTC
GATCCGAGAT TCCAACCTTG GACAGGAGGT GGTGAACATT TTGCATTCTT TAACCAACAA
GTTGCTGCCG AAGCAAATTA TCAAATGTTT TGGGGGGCTC TTCGACCTCT GCTTAATGGC
AACGCAGAGT CACTGGAAAG GCTCGATAGT ATCCGTGATG GATTTACTAC AGTCATGAAT
CAAAAAATGG AAAACATGTG GGCAAAGAAA CTAGGCCTAG TCACCTATGA CGCACCTTTA
GTAAACGAAA TGCTACGGCT CATGGTTCAC ACAAAGGTGG ACTACACAAT CTTTTTCCGA
AAACTTTCAA GTATTCCAAA CAAACTTACG GACTTAAAAG ATAGTTTCTA TCTACCAATT
TCAGAAGAGA CTGAGAGCAA GTGGATCAGT TGGCTACAAA GATGGCGGGA GCAAGTAATA
AGCAAAGGTG ATCAAAATGA AATTTCGGCA AAGATGAAAA GCATTAATCC TAAATACACT
TGGCGGGAAT GGCTCATTAC ACCAGCATAC GAAAAGGCAG AGGAAGGCGA TTATGGCCTC
ATAAAAGAGC TTCAAGCTGT TTTAGATGAA CCTTACGAGG AGCAATCATT AGAAATACAG
AAAAAATATG ACAGACTTAA GCCCAAGAAA TTCTTTGGAG CTGGGGGGGT TTCCCATTAC
AGCTGTTCAT CATGA
 
Protein sequence
MSSTEAMPKT RTFSEFAKQA DYSLMDSLKA DPQATDDGDD HLTREVFSGH YVPVTPTAIS 
KPEYVTHSKT LFNELGLSQE LALDELFRRL FSGDISVATA PMRPVGWATG YALSIYGTEY
TQQCPFGTGN GYGDGRAISV FEGLFNGKRW EMQLKGGGPT PYCRGADGRA VLRSSVREFL
AQDYMQSLGV PTSRSLTLYA SRSETVRRPW YTKDSNSINP DILVETPAAI STRVAPSFLR
VGQIELFARR VRNNEHQDAM KELEMIVKHL IVRNYKKEID PTLSFSNQVV ELANSFRERL
TSLVANWMRI GYCQGNFNSD NCAAGGFTLD YGPFGFCELF DPRFQPWTGG GEHFAFFNQQ
VAAEANYQMF WGALRPLLNG NAESLERLDS IRDGFTTVMN QKMENMWAKK LGLVTYDAPL
VNEMLRLMVH TKVDYTIFFR KLSSIPNKLT DLKDSFYLPI SEETESKWIS WLQRWREQVI
SKGDQNEISA KMKSINPKYT WREWLITPAY EKAEEGDYGL IKELQAVLDE PYEEQSLEIQ
KKYDRLKPKK FFGAGGVSHY SCSS