Gene PMN2A_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0142 
Symbol 
ID3605512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp694341 
End bp695579 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content38% 
IMG OID637686998 
Productserine:pyruvate/alanine:glyoxylate aminotransferase 
Protein accessionYP_291337 
Protein GI72381982 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAATCCC TAAAAAAAAC ACCCCGACTT TGCCTATCGC CTTTTAGGCT CGGAAGATAT 
ATAAACCGAT CTGTTTTCTT GGCCACTCAA ATTCTTCCTT CTGTTGATAA TCAACATCGT
AAAGATTTTG GTCCAACTGT TTCTCCTGAA AGGTTATTGC TTGGGCCAGG CCCATCAAAC
GCAGATCCTG CTGTTTTGAA AGCGCTCTCT CAACCTCCTA TTGGTCATTT AGATCCTTTT
TATGTTGACT TGATGAGTGA GGTGCAAGAG TTGCTTAGAT ATGCTTGGCA AACTAGCAAT
CGATTGACAC TTCCAATGAG TGGCACAGGA AGTGCCGCAA TGGAGGCAAC ATTAGCAAAT
GTCGTTGAGC CAGAAGATAC GGTATTAGTA GCTATCAAAG GATATTTTGG ACATCGACTT
GCGGATATGG CAGGTAGGTA TAAAGCGAAT GTAGAAACAA TTCATAAAGA ATGGGGTAAT
GCATTTTCAC TTCAGGAAAT AGAAGATGCA TTGAAAAAAC ATACCCCGGC TGTTTTAGCA
ATTGTTCATG CGGAAACTTC AACAGGTGTA TGTCAACCTA TGGATGGCAT TGGTGATTTA
TGCAGAAAAT ATAATTGCTT GCTTCTTGTA GACACAGTAA CTTCTTTGGG AGGCGTTCCT
CTTTATTTGG ATGAATGGAA AATTGATCTG GCTTATAGTT GCAGTCAGAA AGGATTAAGT
TGCCCTCCTG GATTAGGTCC TTTTTCAATG AATGAGAGAG CCGAAAATAA AATGTCTAAT
AGAAAAGACA AAGTACCAAA TTGGTATTTA GATGTCTCTT TGCTTAATAA ATATTGGGGC
AGTGATCGTG TATATCATCA TACGGCTCCC GTAAATATGA ATTTTGGCAT TCGAGAAGCG
CTTAGATTGT TAGCTGAAGA AGGATTAGAA GTCTCATGGG GTAGACACCG TACAAATGCA
AAATCGCTTT GGAATTCGTT GGAAAATATA GGTTTGGAAT TACACGTTAA AGAAGAATTA
CGCTTGCCTA CCCTAACAAC AGTGAAAATA CCTGAGGGAC TTGATGGTAA GGCATTTACT
AAGCATTTAC TAAATAATTT TGGAGTTGAA ATAGGTGGTG GATTAGGTGA TCTGGCTGGA
AAAGTATGGA GAATTGGTTT AATGGGATAT AACTCAACCT CTGAAAATGT AGATAAGATA
ATAAATATTT TTGAAACTGA ATTACCTAAG TTTAGATAA
 
Protein sequence
MQSLKKTPRL CLSPFRLGRY INRSVFLATQ ILPSVDNQHR KDFGPTVSPE RLLLGPGPSN 
ADPAVLKALS QPPIGHLDPF YVDLMSEVQE LLRYAWQTSN RLTLPMSGTG SAAMEATLAN
VVEPEDTVLV AIKGYFGHRL ADMAGRYKAN VETIHKEWGN AFSLQEIEDA LKKHTPAVLA
IVHAETSTGV CQPMDGIGDL CRKYNCLLLV DTVTSLGGVP LYLDEWKIDL AYSCSQKGLS
CPPGLGPFSM NERAENKMSN RKDKVPNWYL DVSLLNKYWG SDRVYHHTAP VNMNFGIREA
LRLLAEEGLE VSWGRHRTNA KSLWNSLENI GLELHVKEEL RLPTLTTVKI PEGLDGKAFT
KHLLNNFGVE IGGGLGDLAG KVWRIGLMGY NSTSENVDKI INIFETELPK FR