Gene PICST_91506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_91506 
SymbolBOI2 
ID4841143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp717892 
End bp721232 
Gene Length3341 bp 
Protein Length936 aa 
Translation table12 
GC content44% 
IMG OID640392458 
ProductRHO protein signal transduction 
Protein accessionXP_001386545 
Protein GI150866822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTCCTATACT ACGTCTGTTT GCTCGTTCTA CACCTTATAG AGTCCCGGTA GTTTCATATT 
CCCAAGCCTA CGTTTCTGCA GCTTCTTCTG CACATCCCCA GAATCTCACC ATACAGACCC
TGGATTCCTT TGCTACTTTG GCTTATATAT CTGACGCACA CGTATTATCG TCTGCCATTT
GCCAAGTGGA TAACGTAGAA TCCAACAACC TACTTGTCAC CAGTATCTTG GTGCTATTTC
CATTCATCAC TACACGAGTC ATATCCAGCA GTTCTATCTA GACTAGTCGT TTCAAGTCGT
GCACAGTAGA TTCTCGTTTA TACATCTACC ACCTTTTCCC ATCAACTAAT CATCTTATCA
CTTCACTCCT TACATCAATC AAAATGACTA CAACAGGCGC AGTCTACATC AGTATCAAAC
AGTTCAACGC CCGTCTTGGA GATGAGCTCT CGCTCAAGGT CGGCGATAAA ATCGAAGTTC
TCGCTGACGA CTCAGAATAC AACGACGGCT GGTACATGGG GAAAAATCTC CTAACTAACG
AAGTTGGTTT GTACCCAAAA ACCTTCACAC AAATACTCCA AAAGCAGAAT CCTGATAAGT
CTCTCTTGCG CTCCAGATCA AGACGTGTAG GCACCCCTGT CAACGGTTCG TCCAAAGAAG
GAGCTAGCAC GCCTCCCTTG AACGGTGGCA GTGCTTCTTC CACACCAGCA ACTAAAATCA
GCAATGTGTC TGATTCTGTA GAGAAATTGA ACTTAAACGG TACGGCCAGT ACAAACAAGG
ATACCATTTC TGAGATCGAT AAGGCACTCA AGGAATTGCA GCCAACAAGC GACTCAAATG
AGGTATCTGC AGCTCTGAAA TCAGTACCAA ATGCGGTGTC CAGAACCCAG AAGCGTGTCT
CTTCAGCTCC ACTTACGGAG GACTTGGATC CACTCCAGGC CTCTTCCTGG ACTCCCCAGC
AGGTGTCCTC ATATTTTGCT TTTGTGCTTG GCTTCGATAT GGACGTGGCT GGAAAGTTCT
CAAGACATAA GATCACTGGC CCAATCTTGT TTGAATTGGA TTTGGGCCAT TTAAAGGAAT
TGGATATTGA TTCGTTTGGT ACCAGGTTCG AAGTGTACAA GGAAATTGAG AAATTGAAAG
AGCTTTCTTC GAAATCGATA TCAGACAAAA GTAGACAACA TTCTTTAGCA TCTACAAATG
CGGATCCAAA TGGTAGTACT TTTAGTGAAA CTAGCCCAGG CTCAGAAAAT TTCCAGAGTA
CTGAAACTCT GCCTAAGAAG ACCGATTTCT CTAACAACTC GGACGAGGAT AGAACATTGA
CTAACAACAG CACTCGTTCT CAATCTAAGA CCTACCAGCA ATTGATGCCA TCTGCTCCTT
TGTCTTCTAC TTTCAGGGAT AGCGGGTTCA ACAAGGGTCA CCATAGAAAG AGATCTATGT
CTATGGACAA CTTGGCACAT GATAGTAGTT CATTTACCTC GCCTAGAAAG GCTCCAGAGC
CTCCAAGTGG CACTGCTTCA AGTGGAAATC ACAAATTTGT TGATGATGGC GACCTGAATC
TGGGATTGTA CTTAACCCGC ACAAATGCTT CCAACCCAGG TCTTAGCTCG AGACCCTCTT
CTTCAGTATA TGAGCAATCA GTAAAGAGTC ACAAGAAGAA CGGTTCTCAA GCTTCCAGCA
TTATACACAG AAGAAACTCG TCTGTGAATT TGGCTGCGAA TGCACACAAA AGACATTCTT
CCCTTTTCAG CTTCCTTTCA GGACACGATG ACAGCAAGGC AAACTCCAAG ACTCCAAAGC
TTCAAAGCAC CAACTTATAC AAGGAAACAG TCTCCAGTCC TAGTGATGGT CAGAAAGACG
GATTGACTTC TCCTGCCAAG TTGAAACGTG ATAGCTTGGT ATCAACTCCT CTGAAGCCAA
AGGATGTCAG TTCTGCTGAG AGCCCAATTG ATATCGATGA AGCACAGCTC TCTCCAAGAA
AGCTGAAGAG CATCTCCTAC AAGAAGAGTG AAAGCCCATC TATAAAAGAC GACCAGAGAT
CAGTTTCTGA TGCTAGTGCT GTTGGAAAAT TAAAAAACTT GAGGACTTCG TCTACACAGA
ATTTCCGTAG TTTCACCACC TCTAGAAAGG CGAAGACCTC GGCTTTCCAG GAAGGTATCA
GAGACGTCAC CCCAGATGAT GCCATCAAGT CTGCTAACTA TAGTGGTTGG ATGTCTAAGC
GTTCTAGCAA TACTTTGGCC TGGAGATCAC GTTACTTCAC TCTCCATGGA ACCAGATTAT
CATACTTCGC ATCTTTACGT GATAAGAAGG AAAAGGGGTT GATTGACATC ACTGCCCATA
AGGTGATTCC AATCAGCACC GACTCCGATG AAACCGAGGA CAGGACAGAC AAGTACACCG
CTTTGTATGC ATCGTCGACT TTTAATGGAA GCTACTGTTT CAAGCTTGTA CCTCCCAGAC
CAGGTTTCCG TAAGGGATTG ACTTTCACGC AGCCAAAAAC TCACTACTTT GCTGTAGATT
CACAAGAAGA AATGAGAGGC TGGATCAAAG CATTGATGAC TGCTACCATT GATATCGATG
ATACTGAACC AGTTGTAAGT AGTTGTTCTA CTCCTACGGT CTCTTTAACT AAAGCTAAAG
AGCTCTTGGC CAAGGCTAGA GAAGAAACTA AGTTAAAGGA CGAGGAATTG CGAGCACAAG
GCTTTTTGCG TGATGGAGTC GATGACGACT ATGATCTCCA TGTTCTGAGT GTCAATGACT
TCGCAACCTC AGTCGATACA TCTTCTGTAG ACGATACCAC TGGATCATCT GGAAATGCAC
CAAAGTTGTC TATCGACACC AACGTGAATT CAAGTCAAAA GCAAGTAGGT AAGACTCCAT
CTACTCCACA AATCTCGTCT TCGTCAGCCC AGAGTGGGTT CGCTTCGCCT TATTTGTTGG
CTTCTGGGTT ACTTTCTCCA AAATCCAATT CTACCGCTCT GCCTACCAAC TCCTCGCCTT
CTAACATCAA GATTGACCCC AACTATTTCC AGGATGTACA TCCTTCTATT GCTGATGCCA
GTGAGGCTAC CCCCAAAACC TATAGTAACG GCAGAATTGT GAGTTCCAGA AAGAACTCGC
GTGCGGACAA GATGTTGGCA TACACGAGTG ATCCTTCCGG TAATCACAGT TTTGTAATCA
AGCAGAAGAA ATGAGTCCCT TGCTAATCTT TGAAAAGAGC TACTAATAAT CTAACCCCAA
ATCTCTTTCC GCTTGTTGTA TTTTTAGTGA ATCTAGATAA TGTTATTATC CATTGTACTT
AATAGTGTTT ATTAAATTAA TATTAATAAT GTGTTTATGT T
 
Protein sequence
MTTTGAVYIS IKQFNARLGD ELSLKVGDKI EVLADDSEYN DGWYMGKNLL TNEVGLYPKT 
FTQILQKQNP DKSLLRSRSR RVGTPVNGSS KEGASTPPLN GGSASSTPAT KISNVSDSVE
KLNLNGTAST NKDTISEIDK ALKELQPTSD SNEVSAASKS VPNAVSRTQK RVSSAPLTED
LDPLQASSWT PQQVSSYFAF VLGFDMDVAG KFSRHKITGP ILFELDLGHL KELDIDSFGT
RFEVYKEIEK LKELSSKSIS DKSRQHSLAS TNADPNGSTF SETSPGSENF QSTETSPKKT
DFSNNSDEDR TLTNNSTRSQ SKTYQQLMPS APLSSTFRDS GFNKGHHRKR SMSMDNLAHD
SSSFTSPRKA PEPPSGTASS GNHKFVDDGD SNSGLYLTRT NASNPGLSSR PSSSVYEQSV
KSHKKNGSQA SSIIHRRNSS VNLAANAHKR HSSLFSFLSG HDDSKANSKT PKLQSTNLYK
ETVSSPSDGQ KDGLTSPAKL KRDSLVSTPS KPKDVSSAES PIDIDEAQLS PRKSKSISYK
KSESPSIKDD QRSVSDASAV GKLKNLRTSS TQNFRSFTTS RKAKTSAFQE GIRDVTPDDA
IKSANYSGWM SKRSSNTLAW RSRYFTLHGT RLSYFASLRD KKEKGLIDIT AHKVIPISTD
SDETEDRTDK YTALYASSTF NGSYCFKLVP PRPGFRKGLT FTQPKTHYFA VDSQEEMRGW
IKALMTATID IDDTEPVVSS CSTPTVSLTK AKELLAKARE ETKLKDEELR AQGFLRDGVD
DDYDLHVSSV NDFATSVDTS SVDDTTGSSG NAPKLSIDTN VNSSQKQVGK TPSTPQISSS
SAQSGFASPY LLASGLLSPK SNSTASPTNS SPSNIKIDPN YFQDVHPSIA DASEATPKTY
SNGRIVSSRK NSRADKMLAY TSDPSGNHSF VIKQKK