Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_91093 |
Symbol | |
ID | 4840797 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 773427 |
End bp | 775733 |
Gene Length | 2307 bp |
Protein Length | 457 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640392112 |
Product | predicted protein |
Protein accession | XP_001386345 |
Protein GI | 150866677 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG5024] Cyclin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.018658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.046308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | AAGACTTACA ATCTCTTCCT TTCTTTGTCG TTCTTACTTA TATTGTTAAT ATTGTTCATA TTGTTCATAT CGTTGTCGTT TTTTTATACT GATCCGTATA TATATTTAAC TATATCTATA CTGCAACGAC TCGACCTCCT TTTGTTTCTC CTATATATAT TCCTCTCCAG CTCATCGGTT GGTTCTTCAC TTCCATTGCA TTTGTCTTTT CCGCAAAAGC CGTCTTTCTT TCATCTTGCA TCGGTGTCTC AGCATTGCCC TACGCTTTGT ACATACCATA GACAACCACC TTCACTTGCA AAAGTCAATT GACATTCAAC TCATTCGTTT GGTGTACCTC CGCATCCCTC ATTGTCTACC TTAGATGGCC GACTCACATT AGAACGTCTA GACACATAGA ACATTCGTCT GAAATATTCA GAAATCCTTC ATTAGCCTCA TTAGACATTT CATTTATTCA TTTCCTACCA TGACGACCTA TTCCCACTCG CCTGATGCCT TCCACCAAGT CCGCATGTAT AACTCGTCAG TCAAGTCATC CAACTTCCAC TTGCAGTCGA TGGAGTTCCA GTGCCATTCA GCCGCTGTGT GTGACTACCA GATGGAAATG CTCCACCACT TGCTATCAAT GGAAACAAAG ACTTTACCAT CGCTAATGCT TATCGAACAG CAGCCTGAGA TCAAGTTGGG CATGAGACCG CTTCTTCTCG ACTTTTTGAT GGAAGTCATC ACCATTCTCA ACTTGCTGAA ATCTACTTTC CCCTTGACGG TGAATTTGAT TGACAGATAC TGCTCCACAA GAATCGTCAA GAAACAGCAC TACCAATTGT TGGGATTGAC ATCCCTCTGG ATTTCCTGTA AGAACTTGGA CTCGAAGTTC AAGATTCCCA CCTTGAACGA CTTGAGAAAA ATCTGCGTGG ACAGCTACCA CAAAGAACTC TTCATCGAGA TGGAAAAGCA CATCTTGAAG TCGTTGGAAT GGATGGTGAA CTCTCCAACA TTTGACTCCT TCATTGACTT GTACTTGTCG ATTTTGATCA ACAACCTGTC GAATCCAAAC GTTGCCAACT TGATCAAGAA GTCAAATCAC AGAGTAAAGT TGTTGGCTAC ATATTTTGGA GAGTTGTTCC AATTCTACCC CAATATCTAC TTTGATTACA CTTCTTCGCA AATTGCATTG ATCTCGATCC TTGTCGCCAT CTTGACGTTG AAGATCCCCG TCAACTTGAT CTCCTTGTTG AACTACTTCA ACGACTTGTT GAAGACAAAG GAATACAAAA GTAATGTCAC CAACCCTGCT GAGGACTTTG ACGAGATCTT GTCTGTGTCA ACTTTCCAGA GCTTGTTCAC GAAGGCTTTC TTCAAGAACT TGATAAAAAT CATCGACAAC CCTCCCAAGA GCTTGGTGAT CAAGTACTTC TCAGAAAACG GAAAGTACAC ACAGTTGATG ACAGCTCTGG TGCGATGCGC TACCGAGTCC TTGGCTACCA TGTTGGAACC ACCAGTAACA CCCAGAATAT ACTCTGGCAA CTCCAAGGAC GCGTTGAAGA GGAACGTCAA CATCATCACC ACAATGTTGC CGCTCACTCC CATCTCCAAC AGCACCAGTC CCAGACGTTT CGATGCTGAG CAGATCTTTT CTGATAATGA ATCATCAACT TCCACATCTA CATCCATTGC TACTTCTAAT GCTATTGCTG CAGTTACAGG TACGGGCCAT AGCGTTGAAC CCAACTCTCC TTCGTCGAGA TCCAGCCCCA CATCAATGAA CCCTCCAATC AAGAAGAGAT CATTTGACTG TGTTGCTGAA ACTGACATCA GCACATCTAA GATTGGACAG TCTGATTCGG ATCTTAAGAG ATCCAAGAGC TTGTCCACGA AGCCTGTGTT TTTCATTCCA TGATCTGGAA TACGATATTT CCGGGTCTGG AATTCATGTT AACGACTAAC GATGCTACAT AGTTTGCCGA GTGCTCCCGC TGCATGGATA ACTGGCTTAT CCCATAGCAC TCTAGACATA TTACTTATGT AATCTGTTGC TTTGGTACAC TGTTCATTAC ATTTATTGCG ATTCTTTACT TACTACACTA TGGGAAATGT TATGGTGCCC TTATATACAC AAGTGCTTCG GTGCTTTCTT CTAACCCCCA GCCGGACATT TAGTCATGTC CACCTAAATA AACCAAAAAA CTCTTCAGTT CGTCTTTATC AGTTCCAAAC ACTCCTCGTC ATTCTATCGC ACAGCATATT TATAGTTAGC AGTTGTGGTG ATCTTTCTAT CGATTAAATA CATATTCGTC TTCTACA
|
Protein sequence | MTTYSHSPDA FHQVRMYNSS VKSSNFHLQS MEFQCHSAAV CDYQMEMLHH LLSMETKTLP SLMLIEQQPE IKLGMRPLLL DFLMEVITIL NLSKSTFPLT VNLIDRYCST RIVKKQHYQL LGLTSLWISC KNLDSKFKIP TLNDLRKICV DSYHKELFIE MEKHILKSLE WMVNSPTFDS FIDLYLSILI NNSSNPNVAN LIKKSNHRVK LLATYFGELF QFYPNIYFDY TSSQIALISI LVAILTLKIP VNLISLLNYF NDLLKTKEYK SNVTNPAEDF DEILSVSTFQ SLFTKAFFKN LIKIIDNPPK SLVIKYFSEN GKYTQLMTAS VRCATESLAT MLEPPVTPRI YSGNSKDALK RNVNIITTML PLTPISNSTS PRRFDAEQIF SDNESSTSTS TSIATSNAIA AVTGTGHSKR SFDCVAETDI STSKIGQSDS DLKRSKSLST KPVFFIP
|
| |