| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_91065 |
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| Symbol | TRP6 |
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| ID | 4840460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 222916 |
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| End bp | 224485 |
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| Gene Length | 1570 bp |
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| Protein Length | 512 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391775 |
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| Product | Anthranilate synthase component II Includes: Glutamine amidotransferase Indole-3-glycerol phosphate synthase (PRAI) |
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| Protein accession | XP_001386254 |
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| Protein GI | 126139463 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase
[COG0512] Anthranilate/para-aminobenzoate synthases component II |
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| TIGRFAM ID | [TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.248052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.833789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAGAACCACC CCAGCTTGTA GAATCTTCAG CATGACCAAA GAATTGCCCA AGAGACATGT
CTTAATTATA GACAACTACG ACTCGTTCAC TTGGAACCTC TACCAGTATT TATACCAGTC
ACCATTGTGT GGGAAGGTAG ACGTTTTCAG AAACGACAAG ATCGACATTT CTACCATTGA
AAATCAAGTC AAGCCCGACA TTATCCTCAT TTCTCCAGGA CCGGGCCATC CTACTAGCGA
TTCAGGAATC TCTCGAGACG TCATCAAACA CTTCATGGGA AAACTTCCTA TCTTTGGCAT
CTGTATGGGT CAGCAATGTA TGATTGATGC GTTTGGTGGA GAAGTGACTT ATGCCGGAGA
AATTGTCCAC GGCAAGACAA CTACCATTAA ACATGACGGT AGAGGAATGT TTGACACCGT
TCCACAATCA GTTGCTGTCA CGAGGTACCA TTCATTGGCT GGAACCCAAC AGACATTGCC
AGACTGTTTG GAAGTCACAG CACTAACCGA GACTACTCCA GAGATCATTA TGGGAGTTAG
ACACAAGATT TACACAATTG AAGGAGTTCA GTTCCACCCA GAATCCATTT TGACCGAATC
GGGCCAAATA ATGATCAACA ACTTGTTGTC TGTCACAGGA GGAACCTGGG ACGAGAACAA
AGCCAACGGA TCCGGCTTTT CAAAGAAGGA AAATATTTTG TCCAAGATCT ACAAGCAACG
TCAAATTGAC TACAAGAGAA TTGAGAGCTT GCCAGGAAAA TCACTTGAGC AATTGGAGAT
CTCATTGGCA TTGAACATTG CTCCACCCAT AACAGACTTC TACCAGAGAT TGAAGTACAC
CCAGGACGTG CTCAAGCAAA CCATCATTTT GTCAGAGTTC AAGCGTGCAT CTCCGTCTAA
GGGAGACATC AATATTGATG CGCATCCAGG TAAACAGGCA TTGACATATG CTACCAATGG
ATGTTCCACC ATATCGGTGT TGACCGAACC CAAGTGGTTT AAGGGTTCCT TGGATGACTT
GTCATTGATC CGTAAGGTTA TCGATATTCC AACTACTGAA GGATACAAGA GACCAGCCGT
ATTGAGAAAA GAGTTCATTT TCAGCAAGTA CCAGATCTTG GAAGCTAGAT TGGCAGGCGC
AGATACTGTG CTATTAATAG TGAAGATGTT GAATGATATC AAGTTATTAC AACAACTATA
CGAATACTCT TTGTCGTTGG GTATGATTCC GTTGGTTGAA GTTCAAAACA AGCAAGAATT
GGACCAGGCA GTGAAGTTAA CGTACAACGA TGACACCAAG GAGCCATTGG TGATCGGTGT
CAACAACAGA AACTTAGCTA CATTCGACGT TGATTTGAAT ACCACCAGCT CTTTGGTTGA
ATCTTCAAAG AAAAGCCAAA GAAGGGGTGA TGTTCTTGTG TTGGCATTAT CGGGAATTAC
TTCCGTTGAA GACGTTAAGA ACTACAAGTA CAACGACGGA GTTGACGGCT TTTTGATTGG
CGAAAGTTTG ATGAGAGCAG AAGAAAGGGG AGAGGCAGGC AAGTTCTTGA ACGACTTGTG
CAATTGCTAA
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| Protein sequence | MTKELPKRHV LIIDNYDSFT WNLYQYLYQS PLCGKVDVFR NDKIDISTIE NQVKPDIILI
SPGPGHPTSD SGISRDVIKH FMGKLPIFGI CMGQQCMIDA FGGEVTYAGE IVHGKTTTIK
HDGRGMFDTV PQSVAVTRYH SLAGTQQTLP DCLEVTALTE TTPEIIMGVR HKIYTIEGVQ
FHPESILTES GQIMINNLLS VTGGTWDENK ANGSGFSKKE NILSKIYKQR QIDYKRIESL
PGKSLEQLEI SLALNIAPPI TDFYQRLKYT QDVLKQTIIL SEFKRASPSK GDINIDAHPG
KQALTYATNG CSTISVLTEP KWFKGSLDDL SLIRKVIDIP TTEGYKRPAV LRKEFIFSKY
QILEARLAGA DTVLLIVKML NDIKLLQQLY EYSLSLGMIP LVEVQNKQEL DQAVKLTYND
DTKEPLVIGV NNRNLATFDV DLNTTSSLVE SSKKSQRRGD VLVLALSGIT SVEDVKNYKY
NDGVDGFLIG ESLMRAEERG EAGKFLNDLC NC
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