Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_90954 |
Symbol | |
ID | 4840669 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 898914 |
End bp | 900156 |
Gene Length | 1243 bp |
Protein Length | 336 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391984 |
Product | predicted protein |
Protein accession | XP_001386362 |
Protein GI | 150866688 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.919235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GACCTTAGAT TACTCTGTTA CAAGAATTTG TTGAATGTTT CAGCATTTTT CAATCTCAAT GCCAAGAGCA GTATTTTTCA CTTCATAACC AAATTCAATC GACATATTCA AAGTCATTTT CATATACATA ACGACCAAAA AAGTCTTATT CAATTCGTAG TATATGCCAA GAAGACCCTC TACAGGTACA CAGTCGGATA CTCCTGCTCT CCATGTAGTT CCCAGCTTTT ATGGAGTCTA TCTTCTTCAG CTGGAACCCA AGCCAAGCTC GTTCTATATC GGATCAACCC CAGATCCTCC GCGTAGGTTG AGACAACATA ATGGAGATCT CAAAGCTGGT GGGGCGTACC GCACCAAGCG GGCAGGATTC AGACCCTGGA GGATGTTGCT CGTTGTGTAC GATTTCCCGT CCAAAGTGTC TGCTCTCCAA TTCGAACATT CTTTTCAACA TTGCCATGAG ACAAGACATA TCAAACAAGA AGAAAGAATA TCAAAGAACA AGTTGTCAGG TAGAACGCTA CATCACAAGG TTGCCAACGT AGCATTGTTG CTACGCTCTA GCTACTTTCG CCATTTGCCC CTAAAGGTCT TAGTGTTTGA AGAGGCTGTT TACAATCTGT TTATGAACAA TAAGTTTGTA ACCTGTAGCC ATGTAGACTT ATTGAATACC AATTTCAACG AATACTTTTC AGTGATGGAA AAAGATGTCC AAGGAAATGA AACAATCAAA AACGCTACAA GCCAACTTGA AGCTCAAGGT TCTCAGAAAA GCCAGCTTGA CTCTACTGTA GATTCTTGGA AAACGAGGCA TACAAACGAG AATGAGATAT GGAGCATGGC AAAGGAGGCG GTGATCCTTG GGTCTCCTCG ATGTGCATTG TGTTTGGAGC CAATTGAACA AGTACCCGAA ACTCTGCTGC CAATAAGCAA AAGGTCAGAT CTTCAGAGAT ACTTACAAAG TGAAAGTCTT CCTCTTGTGA CCATGTGCTA TAATCCTCAA TGTAGAGACG TTTTTCATTT GTCATGCCTT GGCCACAGAT TCACTAATAG TGATGGCTTC CAAAGCCTCA TCCCTGCAAC TGTAAATAGG TGCTGTCTGT GTAATGCAAA GTTAGAATGG AGAACGTTGG CCAAGATTGC TACGAAGTTA CGATATTACG TCCTAAAAGA TTCCCTTCAA CTACCAAGTC AAGTCTTGGA AAACGACGAC AACTACGAAT CTCAAAATGT GAATGATTCT TAA
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Protein sequence | MPRRPSTGTQ SDTPALHVVP SFYGVYLLQS EPKPSSFYIG STPDPPRRLR QHNGDLKAGG AYRTKRAGFR PWRMLLVVYD FPSKVSALQF EHSFQHCHET RHIKQEERIS KNKLSGRTLH HKVANVALLL RSSYFRHLPL KVLVFEEAVY NSFMNNKFVT CSHVDLLNTN FNEYFSVMEK DLDSTVDSWK TRHTNENEIW SMAKEAVILG SPRCALCLEP IEQVPETSSP ISKRSDLQRY LQSESLPLVT MCYNPQCRDV FHLSCLGHRF TNSDGFQSLI PATVNRCCSC NAKLEWRTLA KIATKLRYYV LKDSLQLPSQ VLENDDNYES QNVNDS
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