Gene PICST_90914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_90914 
SymbolOSH6 
ID4840621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp708822 
End bp710205 
Gene Length1384 bp 
Protein Length430 aa 
Translation table12 
GC content40% 
IMG OID640391936 
ProductOxysterol binding protein-like protein OBPa 
Protein accessionXP_001386331 
Protein GI150866663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0294422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTGA CCTCAAAGTT AGACAAGCTT AAGCTTATTA GCTCCGGAGG TGGCGATGAA 
CCAGTAGGGA AGTCGAGCCA AAGCGGGCCC GAGAACACAG ATGATATTGA TGAAGTAGAT
AATGAAGGGC AATCAATCCT CATGGGTATT ATTGCCCAAT TGAGACCAGG AATGGACTTG
TCTAAGATCA CCTTGCCAAC ATTCATATTG GAGAAGAAAT CAATGCTAGA AAGAATTACC
AATTTCTTTC AAATTCCACA AATTTTGCTA GAGGCAAATG CAACAACAGA CGACCTAGAA
AGATTCGTCT TGATAGTTAA GTGGTACTTG GCAAGTTGGC ACATTGCCCC TAAAGCCGTC
AAGAAGCCAT TGAATCCAGT TCTAGGCGAA ACTTTTGCTT GCTACTGGGA CGATTTGCCG
GGAAACGAAT CTGCATTCTA TCTCTCTGAA CAGACTTCAC ACCATCCACC AAAGTCTTCA
TATTTCTATC TAGTTCCCGA GCAGAAAATC AGAGTAGACG GTGTAGTAAT TCCGAAATCG
AGATTTTTGG GCAATTCTTC TGCCGCAATC ATGGAAGGAT GGGGACACGT AACTCTCGGT
AATCATGACG ATGAACTTTA CATTATGAAC CAACCAAATG TTTACGTCAG AGGAATCTTG
TTTGGTAAAA TGAAAACGGA ATTAGGAGAC CATATGTACA TCAAGTGTCC CAAAACTGGA
TATGAGGCAG ATATTGAATT CAAAACGAAG GGCTTCATAA GTGGAACATA TGATGCAATC
GAAGGTGTGA TCAAAAACAC CAAGAAGTCC GAAACGTTGT TTGAGATATC CGGAAAGTGG
AATGAAGTAA TGGAAATTAA GAACATAAAG ACTAATAAGA AGGAGGTATT TTACGACACT
AAGAAAACTG TTACACATAG ACCAAAAGTT AGACCTTTAG AGGAACAATG GGATTACGAA
TCCAGGAAAC TTTGGAAACC AACAATTGAT GCACTTAGTA GAAGAGACCA TGAGACTGCA
ACCGAAGAGA AGTACAAAGT CGAGAATGAG CAGAGAACGC TTGCAAAGAA GAGAATTGAA
GATGGTGTTG AATTCCATCC AAAGTTCTTC AGACCAGTGA AGGACCTGGA AACTGACCAG
CTAGATCTAG AGTATCTCAT TTACAAAAAA TTTGATTTGA AGGACGACTC AGAGACGTTG
AAGAAACACT TATTCGAGAT TTCCCCTTTC TTGCCTGGAC AAGTTGCTGA TGAGAAGTAC
CACATTCCAG CTTTCAAGAA ACACAAGGAA TAGGCAAATG CAGTGCAGAG GAATGCCCCG
AGATTTTATA GCTTTTCTTT TCTAGACACA ATTTGAATAA TACAATAGAT ATCAATGTTT
GTTT
 
Protein sequence
MGLTSKLDKL KLISSGGGDE PVGKSSQSGP ENTDDIDEVD NEGQSILMGI IAQLRPGMDL 
SKITLPTFIL EKKSMLERIT NFFQIPQILL EANATTDDLE RFVLIVKWYL ASWHIAPKAV
KKPLNPVLGE TFACYWDDLP GNESAFYLSE QTSHHPPKSS YFYLVPEQKI RVDGVVIPKS
RFLGNSSAAI MEGWGHVTLG NHDDELYIMN QPNVYVRGIL FGKMKTELGD HMYIKCPKTG
YEADIEFKTK GFISGTYDAI EGVIKNTKKS ETLFEISGKW NEVMEIKNIK TNKKEVFYDT
KKTVTHRPKV RPLEEQWDYE SRKLWKPTID ALSRRDHETA TEEKYKVENE QRTLAKKRIE
DGVEFHPKFF RPVKDSETDQ LDLEYLIYKK FDLKDDSETL KKHLFEISPF LPGQVADEKY
HIPAFKKHKE