Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_90914 |
Symbol | OSH6 |
ID | 4840621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 708822 |
End bp | 710205 |
Gene Length | 1384 bp |
Protein Length | 430 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640391936 |
Product | Oxysterol binding protein-like protein OBPa |
Protein accession | XP_001386331 |
Protein GI | 150866663 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0294422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTTTGA CCTCAAAGTT AGACAAGCTT AAGCTTATTA GCTCCGGAGG TGGCGATGAA CCAGTAGGGA AGTCGAGCCA AAGCGGGCCC GAGAACACAG ATGATATTGA TGAAGTAGAT AATGAAGGGC AATCAATCCT CATGGGTATT ATTGCCCAAT TGAGACCAGG AATGGACTTG TCTAAGATCA CCTTGCCAAC ATTCATATTG GAGAAGAAAT CAATGCTAGA AAGAATTACC AATTTCTTTC AAATTCCACA AATTTTGCTA GAGGCAAATG CAACAACAGA CGACCTAGAA AGATTCGTCT TGATAGTTAA GTGGTACTTG GCAAGTTGGC ACATTGCCCC TAAAGCCGTC AAGAAGCCAT TGAATCCAGT TCTAGGCGAA ACTTTTGCTT GCTACTGGGA CGATTTGCCG GGAAACGAAT CTGCATTCTA TCTCTCTGAA CAGACTTCAC ACCATCCACC AAAGTCTTCA TATTTCTATC TAGTTCCCGA GCAGAAAATC AGAGTAGACG GTGTAGTAAT TCCGAAATCG AGATTTTTGG GCAATTCTTC TGCCGCAATC ATGGAAGGAT GGGGACACGT AACTCTCGGT AATCATGACG ATGAACTTTA CATTATGAAC CAACCAAATG TTTACGTCAG AGGAATCTTG TTTGGTAAAA TGAAAACGGA ATTAGGAGAC CATATGTACA TCAAGTGTCC CAAAACTGGA TATGAGGCAG ATATTGAATT CAAAACGAAG GGCTTCATAA GTGGAACATA TGATGCAATC GAAGGTGTGA TCAAAAACAC CAAGAAGTCC GAAACGTTGT TTGAGATATC CGGAAAGTGG AATGAAGTAA TGGAAATTAA GAACATAAAG ACTAATAAGA AGGAGGTATT TTACGACACT AAGAAAACTG TTACACATAG ACCAAAAGTT AGACCTTTAG AGGAACAATG GGATTACGAA TCCAGGAAAC TTTGGAAACC AACAATTGAT GCACTTAGTA GAAGAGACCA TGAGACTGCA ACCGAAGAGA AGTACAAAGT CGAGAATGAG CAGAGAACGC TTGCAAAGAA GAGAATTGAA GATGGTGTTG AATTCCATCC AAAGTTCTTC AGACCAGTGA AGGACCTGGA AACTGACCAG CTAGATCTAG AGTATCTCAT TTACAAAAAA TTTGATTTGA AGGACGACTC AGAGACGTTG AAGAAACACT TATTCGAGAT TTCCCCTTTC TTGCCTGGAC AAGTTGCTGA TGAGAAGTAC CACATTCCAG CTTTCAAGAA ACACAAGGAA TAGGCAAATG CAGTGCAGAG GAATGCCCCG AGATTTTATA GCTTTTCTTT TCTAGACACA ATTTGAATAA TACAATAGAT ATCAATGTTT GTTT
|
Protein sequence | MGLTSKLDKL KLISSGGGDE PVGKSSQSGP ENTDDIDEVD NEGQSILMGI IAQLRPGMDL SKITLPTFIL EKKSMLERIT NFFQIPQILL EANATTDDLE RFVLIVKWYL ASWHIAPKAV KKPLNPVLGE TFACYWDDLP GNESAFYLSE QTSHHPPKSS YFYLVPEQKI RVDGVVIPKS RFLGNSSAAI MEGWGHVTLG NHDDELYIMN QPNVYVRGIL FGKMKTELGD HMYIKCPKTG YEADIEFKTK GFISGTYDAI EGVIKNTKKS ETLFEISGKW NEVMEIKNIK TNKKEVFYDT KKTVTHRPKV RPLEEQWDYE SRKLWKPTID ALSRRDHETA TEEKYKVENE QRTLAKKRIE DGVEFHPKFF RPVKDSETDQ LDLEYLIYKK FDLKDDSETL KKHLFEISPF LPGQVADEKY HIPAFKKHKE
|
| |