Gene PICST_90527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_90527 
Symbol 
ID4840019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp622213 
End bp622738 
Gene Length526 bp 
Protein Length136 aa 
Translation table12 
GC content43% 
IMG OID640391334 
Productpredicted protein 
Protein accessionXP_001385468 
Protein GI126137890 
COG category[B] Chromatin structure and dynamics 
COG ID[COG2036] Histones H3 and H4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAAAAATGGC TAGAACCAAG CAAACAGCAA GAAAGTCCAC TGGTGGTAAG GCCCCAAGAA 
AGCAATTGGC TTCCAAGGCC GCCAGAAAGT CCGCTCCATC TACCGGTGGT GTCAAGAAGC
CTCACAGATA TAAGCCAGGT ACCGTCGCCT TGAGAGAAAT CAGAAGATTC CAAAAGTCTA
CTGAACTTTT GATCAGAAAG TTGCCTTTCC AAAGATTGGT CAGAGAAATC GCCCAAGACT
TCAAGACCGA CTTGAGATTC CAATCCTCTG CCATCGGTGC TTTGCAAGAA TCCGTCGAAG
CCTACTTGGT CTCCTTGTTC GAAGACACCA ACTTGTGTGC CATTCACGCC AAGAGAGTCA
CTATCCAAAA GAAGGATATC CAATTGGCCA GAAGATTGAG AGGTGAAAGA TCCTAAGTGG
TCGGTGTCGG GAACAAACTT CAATTCGTAT TCTGATTCTT TTCAATGTTT ATTTTGTATA
ACGACTGTAT ATTAGTATTA ATGTATTAAT CATGAGATTA TCTTTG
 
Protein sequence
MARTKQTARK STGGKAPRKQ LASKAARKSA PSTGGVKKPH RYKPGTVALR EIRRFQKSTE 
LLIRKLPFQR LVREIAQDFK TDLRFQSSAI GALQESVEAY LVSLFEDTNL CAIHAKRVTI
QKKDIQLARR LRGERS