| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89978 |
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| Symbol | SYE1 |
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| ID | 4839615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1454691 |
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| End bp | 1456889 |
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| Gene Length | 2199 bp |
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| Protein Length | 720 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640390930 |
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| Product | glutamine-tRNA ligase |
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| Protein accession | XP_001384967 |
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| Protein GI | 126136887 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase
[TIGR00463] glutamyl-tRNA synthetase, archaeal and eukaryotic family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.220095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTGA CCTTGTCAAT TGCCGCCAAG GCTCCATTCG TAGCATACCC CGCGCTTATT
GCTGCCAACT TTGTCAACAC TAGCGATGTT GACTCGTCAA TTCTCATTGA GTTCATTGAT
GAAAAATCCG TAGAGGGCTC TGATTCTTCG GTCAAGTTGG TTTCTGCCGG AAAGACCGTC
ACCGACCAAG TAGAGATCTT GAGTATTTTG GCTGAACAGT TCCCTTCTGT CTTGACTGCT
GAATTGGGCA ATGTATGGTC CAAATTTGCT GTGGATAAGT TATATGTTAA GAACTTCAAG
GAGTTGGCTG TCGACTTGGA AAAGCTCGAT GCCCATCTTA ACTTCAAATC TTTCATTAGT
GGTTACAGCT ACACCACTGC TGATATTGCT GTGTGGGGTG TCTTGAGAGC CAACGCCTTG
ATGGGTTCTG TGATCAAGAA CGGCGTGTAC ACCAATGTCT CCAGATGGTA CTCGTTGTTA
GCTGATGATT CCAGATTCGA GTCAGTTGTT GAGTTCATGA TTAAGTCTGT CAACGACTTG
AGAAAGTCTG CCAAGACAGC CAAGAACGGC GGAAAGAAGG AAACACACAA GGCCAACTTT
GAAATCGACT TGCCTGGCGC CGAAATGGGC AAAGTTGTTA CCCGTTTCCC TCCTGAACCT
TCTGGATACT TGCACATTGG ACATGCTAAG GCTGCCATCT TGAACGAGTA TTTTGCCCAC
AATTACAAGG GTCAATTGGT GATCCGTTTC GACGACACCA ACCCTACAAA GGAGAAGGAA
GAGTTCCAGG ACTCGATCAT TGAAGACTTG GCCCTCTTGG GAGTCAAGGG TGAGAAGGTC
ACCTTTTCCT CGGACTACTT CGACACTATG TACGATTTAG CTATCAAGTT GATCAAGGAC
GGAAACGCCT ACTGTGATGA CACACCTTTA GAAAAGATGA GAGAAGAGAG AATGGTGGGT
GAAGCTTCGG CCAGAAGAAA CAGATCTGTC GAAGAAAACT TGCACATCTT CACTGAAGAA
ATGAAGAACG GAACTGAAGA AGGCTTAAAG AATTGTTTAA GAGCAAAGAT CGACTACACT
GCTCCAAACA AGGCCTTGAG AGACCCCGTA ATGTACAGAT GCAACTTGAC TCCTCACCAC
AGAACTGGCA CCCAGTGGAA GATGTACCCT ATCTACGATT TCTGTGTCCC AGTTGTTGAT
TCTATCGAAG GAATCACCCA TGCTTTGAGA ACTAATGAGT ACAGAGACCG TAATCCACAG
TACCAATGGA TCCAGAAGGC TTTGGGCTTG CGTCCCGTCG AAATCTGGGA CTTCGGCAGA
GTTAACTTTG TCAGAACGTT GTTGTCCAAG AGAAAGTTGC AGTGGTTCGT CGACAAGGGC
CATGTCGCCA ACTGGGATGA CCCTAGATTC CCAACAATCA GAGGTGTCAG AAGAAGAGGT
ATGACTATCG AAGGTTTGAG AAACTTCATC ATTTCCCAGG GCCCTTCCAA GAACATTATC
AACATGGACT GGTCCACTAT CTGGGCCATG AACAAGAAGG TAATCGACCC TGTTGCTCCT
AGATTTACTG CTGTCTACGC CGAAAATGCT GTCCCTGTCA AATTGTTGAA CGTGCCTGCT
GAAGCATACA CAGAAGAGAA GCCTAAGCAC AAGAAGAACC CAGAAGTCGG CAATAAGCCA
GTCGTCTACT TCAACGAGTT GTTGATCGAC CAGGCTGACG CCGACTTGGT TGAAGGCGAG
GAAATCACTT TCATGGACTG GGGTAATGTC ATCGTTTCCA AGGTCAACAA AGAAGGCGAT
GTCGTCAAGT CTATCGAAGC CAACTTGCAT TTGGAAGGTG ACTTCCGTAA GACTTCCAAG
AAGATCACGT GGTTGGCTAA CACCAGCGAC AAGGTGGACG TCGATTTGGT TGACTTTGAT
CACTTGATTA CCAAGGATAA GTTGGAAGAA GAAGACAACT TCGAAGACTT CCTTACCCCT
GAGACCGAGT TCCACACCAA GGCTTTCGCT GATTTGAACA TTCGCAAGTT GAAGACTGGT
GACATCATCC AATTCGAAAG AAAGGGTTAC TACAGAGTTG ACCAACCATA CAAGGAAGGC
AAGCCAGCGG TGTTGTTCAC CATTCCCGAC GGTAAGGCCG TTTCCAAGTA TGGCAAGAAG
TAGTATATAA TGCCTCTCTA ATGAACATAT TATATAAGG
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| Protein sequence | MSLTLSIAAK APFVAYPALI AANFVNTSDV DSSILIEFID EKSVEGSDSS VKLVSAGKTV
TDQVEILSIL AEQFPSVLTA ELGNVWSKFA VDKLYVKNFK ELAVDLEKLD AHLNFKSFIS
GYSYTTADIA VWGVLRANAL MGSVIKNGVY TNVSRWYSLL ADDSRFESVV EFMIKSVNDL
RKSAKTAKNG GKKETHKANF EIDLPGAEMG KVVTRFPPEP SGYLHIGHAK AAILNEYFAH
NYKGQLVIRF DDTNPTKEKE EFQDSIIEDL ALLGVKGEKV TFSSDYFDTM YDLAIKLIKD
GNAYCDDTPL EKMREERMVG EASARRNRSV EENLHIFTEE MKNGTEEGLK NCLRAKIDYT
APNKALRDPV MYRCNLTPHH RTGTQWKMYP IYDFCVPVVD SIEGITHALR TNEYRDRNPQ
YQWIQKALGL RPVEIWDFGR VNFVRTLLSK RKLQWFVDKG HVANWDDPRF PTIRGVRRRG
MTIEGLRNFI ISQGPSKNII NMDWSTIWAM NKKVIDPVAP RFTAVYAENA VPVKLLNVPA
EAYTEEKPKH KKNPEVGNKP VVYFNELLID QADADLVEGE EITFMDWGNV IVSKVNKEGD
VVKSIEANLH LEGDFRKTSK KITWLANTSD KVDVDLVDFD HLITKDKLEE EDNFEDFLTP
ETEFHTKAFA DLNIRKLKTG DIIQFERKGY YRVDQPYKEG KPAVLFTIPD GKAVSKYGKK
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