| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89908 |
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| Symbol | |
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| ID | 4839141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 384134 |
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| End bp | 386165 |
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| Gene Length | 2032 bp |
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| Protein Length | 628 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640390456 |
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| Product | predicted protein |
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| Protein accession | XP_001385088 |
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| Protein GI | 150865751 |
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| COG category | [I] Lipid transport and metabolism
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5153] Putative lipase essential for disintegration of autophagic bodies inside the vacuole |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.383222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGGCACTTAG AAACGCGTGT ATAGCTTAAA CCAAAGAATA TGTTAGCGGC TGAAAAGAGG
CGTCTTCTCC ATAAGACGCG TCCAGTTTCA GCTTCGGAAA AGCCAGGATC CATATATCCT
CAACGAGCCT TATATTTATT AGTGTGTTTC TCCATTGCCA CCATATCGCT TGGATATCTC
CACTTTATTG GTGCTATTGA TATTGGCAGA TTTGGAATTC TGTCTGTAAT AAGCGATTTG
ACCAAACAAG ATGCTGTCAG CGAGCCTTTC AGTTTACATA AAGAACAGAC TCTGCTGGTT
CATACTGAAT CAGATGAGCA GACGTTTGAA CTCAAACATA TCTTCCATCA CGGAACTGGG
CCAGAGAACT ATCGATTGCA TCGGCGGTTG GACATTACGC CAAGCTACTT GGCCAAGCAC
AGCAGCTATT TCGCCGATTT TTCCCAGAGA TTGGCCCAGA AAAGGGATGA CAGCTCCGTA
GACTCCGAGA ATTTGGAAGA TATCTACAAT CTCATGGACT GGCCGGACGT ACATAAGCAC
AAAAATCCAT TTACGATCCA GTTGCCAATC AAAAAGGACC ACAAAAAGGG TAAAGTCGTG
AGACTTAAAG ACAGACATGA GCCTGGCTTT CTCGATTCGT ATCTCTCTTA TGCCTTACAG
GTTAAAGGTG ACCCTAAAAT TCTCAACAGA ATAGCGTTGG AATGGGAAGA TGAGATAGAA
ATCGATATCC CCAACATGAA AGACAAGGAC ACCTTGGTTT CGTTGGCTAC GATATCATCT
AATGCTTATG TGAAGTTTCC CAAAGACGAA AACGAGAAGA ACAAACTGGA CTGGATCGAT
GTGGGCCAGT GGGAACCTGA CCAGGAAAAC GTAGACCTTA ACTTTGGTTG GGAAGATATA
GGCTTAAGAG GCCATGTCTT TGTAAGCAAA GACAATAAGA CTGTAGTGAT AGGAATCAAA
GGAACATCTG GAGCTGGATT ACCCGGTGGA GGAAGCGACG AAACTGCTGG AAATGACAAG
GACAACGATA ATCTCTTGTT TTCGTGCTGT TGCGCTCGTG TTGGTTATAT GTGGACGACA
GTCTGCAATT GCTACGAGAA AACCTATACT TGTAACCAGG ACTGTTTGGA AAAAGAACTT
TTGAGAGAAG ACAAGTACTA CCAGGCGGTA TTAGACCTCT ATCGTAACGT CTCTGCCATT
TATCCTCCTG AAACAACCAA TGTTTGGGTC ACGGGCCATT CATTAGGAGG TGCCTTGGCT
TCCTTATTGG GAAGGACCTA TGGCTTACCA GTTGTAGCAT TTGAAGCTCC GGGTGAAATG
TTGGCTACCA AGAGATTACA CTTGCCCCAG CCGCCAGGAA TCCCCAAGTT CATGGAAAAT
ATCTGGCATG TAGGAAACAC GGCAGATCCA ATTTACATGG GAGTTTGCAA TGGAGCTTCC
AGTACTTGTA ATGTAGCTGG ATACGCCATG GAAACGGCAT GTCACACAGG CTACCAATGT
GTATACGATG TAGTTACAGA CTTGGGCTGG CGAGTGAACT TATTGAATCA CCGGATCCAT
ACGGTGATCG ACGACATCAT CTTGGCCTAT AACGACACAG CACAATGTAT CGAACAGCCA
CCTTGTCGCG ATTGTTTCAA CTGGAGGTTC ACTAGTCACG ACGACGATGT ACCAGATGAA
CCGGAGATGC CCAATCCATT GAGACCGAAG CCTAAGCCCA AGCCCCTGTC GTCTACCAGC
GACGGAAAGA ACAACAGGAT CTCATCTACG GCCACTACGA CTATTCTGCC CACTAGCAGA
AAAGCAGACC CTACTTCTTC TGATATCAGC GAGCCTAGCG AGTCCCCAAA GAAGTGTTTG
GAGAGAACGT GGTATGGGTG GTGTTCCAAG TGGGGCTACG ACGGTGATGT AGACGATGAT
CAATAGGGTA AGGCACAGGG TTAAGAATTA GCATGTACAA AGGGTGCATG CTGCTTTTAT
TAGATATTTG GTATATGTAT GGGATAGGAA TGTTTATTAG AATAAGAGAT TG
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| Protein sequence | MLAAEKRRLL HKTRPVSASE KPGSIYPQRA LYLLVCFSIA TISLGYLHFI GAIDIGRFGI
SSVISDLTKQ DAVSEPFSLH KEQTSSVHTE SDEQTFELKH IFHHGTGPEN YRLHRRLDIT
PSYLAKHSSY FADFSQRLAQ KRDDSSVDSE NLEDIYNLMD WPDVHKHKNP FTIQLPIKKD
HKKGKVVRLK DRHEPGFLDS YLSYALQVKG DPKILNRIAL EWEDEIEIDI PNMKDKDTLV
SLATISSNAY VKFPKDENEK NKSDWIDVGQ WEPDQENVDL NFGWEDIGLR GHVFVSKDNK
TVVIGIKGTS GAGLPGGGSD ETAGNDKDND NLLFSCCCAR VGYMWTTVCN CYEKTYTCNQ
DCLEKELLRE DKYYQAVLDL YRNVSAIYPP ETTNVWVTGH SLGGALASLL GRTYGLPVVA
FEAPGEMLAT KRLHLPQPPG IPKFMENIWH VGNTADPIYM GVCNGASSTC NVAGYAMETA
CHTGYQCVYD VVTDLGWRVN LLNHRIHTVI DDIILAYNDT AQCIEQPPCR DCFNWRFTSH
DDDVPDEPEM PNPLRPKPKP KPSSSTSDGK NNRISSTATT TISPTSRKAD PTSSDISEPS
ESPKKCLERT WYGWCSKWGY DGDVDDDQ
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