| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88824 |
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| Symbol | MOT1 |
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| ID | 4838519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1445906 |
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| End bp | 1452011 |
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| Gene Length | 6106 bp |
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| Protein Length | 1901 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389834 |
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| Product | transcriptional accessory protein involved in TBP (TATA-binding protein) regulation helicase MOT1 |
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| Protein accession | XP_001384576 |
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| Protein GI | 150865383 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.44938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.674411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCTGTCTGCA AAAAACAATT CCAACACCTT CGTGTGGCTG CAGTAGTGAC AGTCTGTTTG
TTTTCAATTG ACTTCACAAC TCTTCCAGTA ACGAGTCACA TTCCTGGTTC TCGGACACTT
TGTCATCAGC CTCAGAACTA CAGGCTCTAT ACCATATTGT ATACAGATTA TACTCAGTTA
GTAGCAGATC TAGTGGCAGA AAAACACCAA CTTCTAGATC CACATCACAT CCACTCTAGA
TTCGTTCTAG ACAGCATTCT ACGTCGACAC ATTGTCAAGA TCGTTCCAGT GGCTCCTTTT
GGATTTATAG ACATCCCACT TTTGGCAGTT CGATTGCATC TCGTTCTTTA TTCCATGTAT
CATAGCAGTT CCTATCTCAG CATCTCATAC ACACCAATTA ATGTCTCGAT TAGATAGATT
GGTATTGCTT TTGGAAACGG GTTCGACCCC CTTCATCCGA AATACCGCCG CGGACCAGTT
GTCGGATCTC GCTGCAGCGC ATCCAGAAGA GATACTATCG CTTTTGGGAC GGGTATATCC
GCACTTGAAG TCGCCCAAAT GGGAAACAAG AATAGCGGCT GCGAGAGCAT TTGGTGGCAT
TGTGAAAAAC GCCGATGTGT GGGACCCGAA TTCCGAAGAG GCTATAAAAA AAGAACAGGA
GCAAGAAGCG TTTGTCAAAA AGGAGATGGA CGAAACCGTT TCCATCAAGG TCAAACAGGA
AGAAGAAGAG GATCACATAA AAATAAAGTT GGAACAAGAC GAAGAGCTCC AAAAGTTGGA
CAATAACTTG AGCAGCTTGG TGTCGTTTGC GTCGTTTGAT CTCGCAGAAA TACTAAAGAG
TGGAGCACGG TTGCTTGCCA CGAAGTCGGA CGAGATTCCG GACCCATCAT CATGCGACGA
GAACTCGCTT ATCGGAAGAA TCAAGAAAAG AAAGACCTCC ATCATAAAAG ACGAAGAAGA
AGAAATAAAT TCCAAGTCTT CCGCTTCTCC TCCCACACCA TTTGCATCTA CCCCAGGTAC
GCCGACGTCA GCCAAAGCAG AATTAAATAT ATTGAAGGAA TCTACAGATT CCGGCAAGCC
CGTCTCCAGT GCCAGGTTGA AAGCAATGCA AAAGAGAAGA GCCAAGGTGA ATGCCAGATC
AAACGCCAAT AGAGTAAAAC AAGTAGACAT TTCTCAGAGT TCCATATCAC GACAAATGAT
TGAAAATGGT GAAGGTCTCA ACGAGGAGAA TGGCGCAGCA GAGACTCCGC AATTTGACAT
CACCTCACAA CAAGGCGGTG AAAAGTTGGT TGTAGAAGCT AAGGCTCCTG AATTATCACC
TTTGTTATCG CAACACAGTA AAGTTGCTGG ACTTGTGTGG CAATTCCAGG GTGTCTATGA
ATTGCTCTTA GACGACTTGT TTAACGACAA GTGGGAAATA AGACACGGTG CTGCATTGGG
GTTGCGTGAG TTGATCAAGA AACACGGGAA AGGTGCTGGA AGAGTGATGA ACAAATCCAG
AGAAATCAAC GACACCAACA ACGCAGCAAC CTTGGAGGAT TTAGCTGTCA GACTTTGCAC
TTTATTCTCC TTGGATAGAT TTGGCGATTA CGTTTCTGAT ACTGTAGTTG CTCCAGTGCG
AGAGTCTGGA GCTCAAACAT TGGCAGCATT ATTGATTCAT TTGGATAACA TCACCGTCAT
GAGAACTTTC CAATGTTTGA ACGACTTAGT ACTCCAAATT GGTTTGACAA CTAAATGTTG
GGAAGCAAAG CATGGAGGTA TGTTGGGTGT AAGATACTTT GTCAGCGTCA GAACGGATGT
TCTATTGGAG CATCCCGAAT TGTTGGATCA AGTGGTTAAT ATGGTTCTCC ACGGATTGAA
AGAGAGTGAT GATGACGTCC AGTCTGTAGC TGCATTGACG CTTACTCCTA TCGCTTCGAA
TTTTGTTTCT ACCAAAAAGA ATCTAATTCA CACTTTATTG ACTGTCATCT GGGATTGTTT
AACCAATCTA CGTGATGATT TATCCGCATC CATTGGTTCT GTCATGGACT TATTGGCCAA
GTTGTGCACA CATCAAGAGG TCATCGAAAT AATGCAGAGG GATGCACAGG AAGACTACAA
CAACTCGTTT GAGTTGTTGG TTCCTAGACT ATTTCCCTTT TTGAGACACT CGATCACAAA
CGTTAGAAAA GCCGTATTGA GGACAATTAT TGAATTTTTA TCGATATCCG ATCCAACCAC
AAAGACATGG ATCAATTCAA AAGCATTGCG ATTGATTTTT CAGAACTTAC TTGTTGAGCA
GAATCGTGAT GTCATGCAGT TATCCATAGA TGTCTTCGAA AAATTGATAG CTGAAATCAA
CAGCAATGAC AATTTGCCTT CGATGGATCT GCTCTTTGAA GATCAATACC AGCCACTCTT
AATTTTGTTA ATGACCCCAG TAGGTATAGC GAGACACAAC TATCAAATGA ATACCAATTT
GATCGTTCGT CCATCTGGTC ATATTCTCGG GGCCATCGAC GATGATGAAA AGCGTGGTCG
CAAGAGAAAG TCCGCTACTG AACAAGTCTC TGATATACCG ATTGGGGAAG AACTTAGAGT
CAATATTGAC GCTCCTATCT TTAAGGGAGA TGTTATGTTA GTTGGATACG ATAAGTTCAT
GGCGACAAAA AGTGCTGCTG CACATTCTTT TGGTGTCACC ATGTCATTTA TTTCCTCAGA
TTCTCAATTG AACGATATAT TTGAATTGCT TCGTTCGTAT TTGAAGTCGC CACACTCCAC
TCCAAGGTTG CTTGCTGCCT TGGTAGTTCA GGAGTATGCT CAAGCCGTAA AAGCTAGAAA
GTTGTCACCG TCTCCAAAAG CTATTGAACT ATTCTCAGAA CCACTAGGTA CAGTGTTACA
AGATCCTGAG TCTTTACCTT ATTTCCGAGA ATTGGTTCCA ACCTTGAAAG CTGTAAGAAC
TTCTTGCTTG CAATTGTTTG ACATTTTCAT CTCTGTAGCC AAAGTCCCAC CAGTAAAGAT
TCCACAGTTA CCAGTAGTGG TACAAGGTGA GTCAGAAGCA GGACCTGGAG CTTTCGGAAT
TGAGAATGCG GAGAAATTGA TAGATGAAAC TTTCAATAAA TTGAAGAAGA ACTTGTCTGC
CATGTACAGA ATGACTGCCA ATCAAGCTCT TGATGATGCC AGACATCGTA TCATCGTTGC
AATTGACGAA GCAAAAGCTG CTCGTTCCAG TAGAACAGTT GGTATTCTCT CGACGTACGC
CGCCTCAATT CTTGCATTAT CGGGAGTTCC CAAGAAACTC AATCCAGTTA TCAGGTCCTT
GATGGACAGT ATCAAACAGG AAGAAACTCT TCTTTTACAA GAGAAGTCTG CTGATGCTGT
AGGTCGTTTG ATTCAGGAGT TGAATGAAGT TGGTAAGAAG GGTGCTGCTG ACAAGATAGT
CAAGAACTTG TGTGCCTTTT TGTGTGTAGA CACTTCCGAA GTTCCAGAAT TCCATCATAA
CGTGATCTAC AAAGACGATA TATTGTCGTT GAAGAAGGAA GAAGCTAAGA CGGATCCACT
AGATATAGCT GCCCATGAGA AGGCTGTTCA TGAAGCCAAG ATCAAGAGGA ATGGGGCTCT
GTTATCGTTG GAAGCTTTGT TAAAGATTTA CAATGCTGAT TTGTTTGAGA AAGTTCCAAA
GTTGAAGGAA GTGATGCTTG AACCCTTGAG GTTGTTGGAG AACTCGATTT CGGAAGAATT
GGTCAAGGAC GAATTGAAAG GTCAAAGTAT CATCGATGCC TTGGGAATTC TTCGTGCTTT
ATTGCCTAAA TTAGATAAGT CATTGCACGA CCAAGTTGTC GAGTTCCTAC CTTTGTTGTT
GCCAGGATTG CAATCTGAGT ATTCTGTCTT CCGTTACTCA TGTGCCAAAT GCTTTGCAAC
TATTTGTTCT GTTGTTCCAA CGAAGGCATT CACCTATTTG GTTAAGTATA TCTTGCCCAT
GTTGAATAAC GCTGGTCGGG TCAGAGAAAG ACAAGGTGCC ATTGAAGCCA TATACCACAT
CTCTTCAACT ATGGGTTCTG ACATATTGCC CTATATCGTT TTCTTGATTG TTCCAGTTTT
GGGAAGAATG AGTGATTCCG ATCACGATGT TCGTGTTTTG GCTACGACCA CCTTCGCAGC
AATCATCAAG TTGGTTCCTT TGGAAGCCGG TATTCCTGAT CCAGAAGATA TGCCAAAAGA
GTTGTTGGAG GGTAGAGACA GAGAAAGAGA CTTTATTCAA CAGATGATGG ATCCCACGAA
GATCCAACCA TTCGACTTGC CGGTGACCAT TAAAGCTACT CTTCGTAAGT ATCAACAAGA
AGGTGTTAAC TGGTTGGCTT TCTTGAACAA GTACCATTTG CATGGTATTC TCTGTGATGA
TATGGGTCTT GGAAAAACGT TGCAAACCAT TTGTATTGTC TCTTCTGATC ACTATTTGAG
ATCTGAGAAA TTCAAAGAAA CGCAGGCAGC TGAATTCCGG AAGTTGCCCA CCTTGGTAAT
TTGTCCTCCA TCGTTAACTG GGCACTGGGA GCAGGAAATC AATGAATATG CTCCATTTTT
GAAGGTGTTG ATCTATGCTG GAAACCCCAG TATTAGAACG CCATTGAGAA GTCAGATTCC
TGATGCTGAT ATTGTAGTTA CCTCTTACGA TGTCTGCCGT AATGATGTAG AGTTTGTTAC
CTCTCATGAT TACAACTATT GTGTTTTAGA CGAAGGTCAT ATCATTAAGA ATGCGGCCTC
GAAATTAACC AAGTCTGTGA AGAGAGTCAG AGCAGAACAC CGTTTGATAT TGTCTGGAAC
TCCGATTCAG AACAATGTTT TGGAGTTGTG GTCGTTGTTT GACTTTTTGA TGCCTGGTTT
TTTGGGTACT GAAAAAGTGT TCCATGAAAA GTTTGCCAAA CCTATAGCTG CTAGTCGTAA
TAGCAAAACT TCTTCAAAGG AACAAGAAGC TGGAGCATTA GCTTTGGAGT CGTTGCACAA
ACAGGTTTTG CCATTTATGT TACGTCGTCT TAAGGAAGAT GTGTTATCAG ACTTGCCACC
CAAAATTGTT CAAGATTACT ACTGTGAATT GAGCGATTTA CAGAAAAAGT TGTACAAGGA
CTTTGCCCAA AAGCAGAAGT CGACTGTCCA AGAAGAAGTG AGCAAGGAAG GAGAACAAGG
AGCTAAGCAG CATGTTTTCC AAGCCTTGCA ATACATGAGG AAATTGTGTA ATCATCCAGC
ATTGGTTTTG AATCCCGATC ATCCAAAATA TGCTGAGGTG ACCCAATATT TGGCCTCCCG
CAAATCTGAC CTCAAGAGTA TCGAGCATTC ACCCAAGTTG TTATCTTTGC AAGCATTATT
GCTAGAATGT GGAATTGGAG TAAACGATAG CGATTATTCC AAGAGTAAAA GAAAACAGCA
ACAACTGTTG ATTTCATCTG AGGGAGTGAT CTCTGAACAT AGAGCTTTGA TCTTCTGTCA
ATTGAAGGAT ATGCTTGACA TTGTAGAGAA CGAGTTGTTG AAGAAGTATA TGCCTTCGGT
TACATATATG AGGATGGATG GTAGCACTGA TCCCAGAGAT AGACAGGGAA TAGTGCGTAA
GTTCAATGAG GATCCTTCCA TTGATGTGTT ACTATTGACT ACTAAAGTTG GAGGTTTAGG
TTTGAACTTG ACTGGTGCCG ACACCGTTAT CTTTGTAGAA CACGACTGGA ATCCTATGAG
TGATTTACAG GCTATGGACA GAGCGCATAG ACTTGGACAA ACCAAAGTGG TGAATGTTTA
CCGATTGATC ACGAAGGATA CGCTTGAGGA GAAGATAATG GGTTTGCAGA AGTTCAAAAT
CAACATTGCC TCTACAATTG TCAACCAGCA GAATGCGGGA TTGTCTTCGA TGGATACCAA
CCAGTTGCTA GATCTTTTCG AAGTAGACGA AAAGGCTTCT AAGCAAAGTG AAGATGTCGA
AGCAAAGCAG GATGAACGAG GAGAGAGTGG TGGAGTTCCG GAGGACGTCG CTGGAGGTCT
TACAGGCAAA GCAGCTGGAG CTGTAGGTGA GTTGGCTGAT TTATGGGATG AGTCCCAGTA
TGAGGATGAA TACAACCTCG ACAACTTCAT CAAGACGCTT AAGTGA
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| Protein sequence | MSRLDRLVLL LETGSTPFIR NTAADQLSDL AAAHPEEILS LLGRVYPHLK SPKWETRIAA
ARAFGGIVKN ADVWDPNSEE AIKKEQEQEA FVKKEMDETV SIKVKQEEEE DHIKIKLEQD
EELQKLDNNL SSLVSFASFD LAEILKSGAR LLATKSDEIP DPSSCDENSL IGRIKKRKTS
IIKDEEEEIN SKSSASPPTP FASTPGTPTS AKAELNILKE STDSGKPVSS ARLKAMQKRR
AKVNARSNAN RVKQVDISQS SISRQMIENG EGLNEENGAA ETPQFDITSQ QGGEKLVVEA
KAPELSPLLS QHSKVAGLVW QFQGVYELLL DDLFNDKWEI RHGAALGLRE LIKKHGKGAG
RVMNKSREIN DTNNAATLED LAVRLCTLFS LDRFGDYVSD TVVAPVRESG AQTLAALLIH
LDNITVMRTF QCLNDLVLQI GLTTKCWEAK HGGMLGVRYF VSVRTDVLLE HPELLDQVVN
MVLHGLKESD DDVQSVAALT LTPIASNFVS TKKNLIHTLL TVIWDCLTNL RDDLSASIGS
VMDLLAKLCT HQEVIEIMQR DAQEDYNNSF ELLVPRLFPF LRHSITNVRK AVLRTIIEFL
SISDPTTKTW INSKALRLIF QNLLVEQNRD VMQLSIDVFE KLIAEINSND NLPSMDSLFE
DQYQPLLILL MTPVGIARHN YQMNTNLIVR PSGHILGAID DDEKRGRKRK SATEQVSDIP
IGEELRVNID APIFKGDVML VGYDKFMATK SAAAHSFGVT MSFISSDSQL NDIFELLRSY
LKSPHSTPRL LAALVVQEYA QAVKARKLSP SPKAIELFSE PLGTVLQDPE SLPYFRELVP
TLKAVRTSCL QLFDIFISVA KVPPVKIPQL PVVVQGESEA GPGAFGIENA EKLIDETFNK
LKKNLSAMYR MTANQALDDA RHRIIVAIDE AKAARSSRTV GILSTYAASI LALSGVPKKL
NPVIRSLMDS IKQEETLLLQ EKSADAVGRL IQELNEVGKK GAADKIVKNL CAFLCVDTSE
VPEFHHNVIY KDDILSLKKE EAKTDPLDIA AHEKAVHEAK IKRNGASLSL EALLKIYNAD
LFEKVPKLKE VMLEPLRLLE NSISEELVKD ELKGQSIIDA LGILRALLPK LDKSLHDQVV
EFLPLLLPGL QSEYSVFRYS CAKCFATICS VVPTKAFTYL VKYILPMLNN AGRVRERQGA
IEAIYHISST MGSDILPYIV FLIVPVLGRM SDSDHDVRVL ATTTFAAIIK LVPLEAGIPD
PEDMPKELLE GRDRERDFIQ QMMDPTKIQP FDLPVTIKAT LRKYQQEGVN WLAFLNKYHL
HGILCDDMGL GKTLQTICIV SSDHYLRSEK FKETQAAEFR KLPTLVICPP SLTGHWEQEI
NEYAPFLKVL IYAGNPSIRT PLRSQIPDAD IVVTSYDVCR NDVEFVTSHD YNYCVLDEGH
IIKNAASKLT KSVKRVRAEH RLILSGTPIQ NNVLELWSLF DFLMPGFLGT EKVFHEKFAK
PIAASRNSKT SSKEQEAGAL ALESLHKQVL PFMLRRLKED VLSDLPPKIV QDYYCELSDL
QKKLYKDFAQ KQKSTVQEEV SKEGEQGAKQ HVFQALQYMR KLCNHPALVL NPDHPKYAEV
TQYLASRKSD LKSIEHSPKL LSLQALLLEC GIGVNDSDYS KSKRKQQQSL ISSEGVISEH
RALIFCQLKD MLDIVENELL KKYMPSVTYM RMDGSTDPRD RQGIVRKFNE DPSIDVLLLT
TKVGGLGLNL TGADTVIFVE HDWNPMSDLQ AMDRAHRLGQ TKVVNVYRLI TKDTLEEKIM
GLQKFKINIA STIVNQQNAG LSSMDTNQLL DLFEVDEKAS KQSEDVEAKQ DERGESGGVP
EDVAGGLTGK AAGAVGELAD LWDESQYEDE YNLDNFIKTL K
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