| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88820 |
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| Symbol | AMD3 |
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| ID | 4838683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 456702 |
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| End bp | 459127 |
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| Gene Length | 2426 bp |
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| Protein Length | 548 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640389998 |
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| Product | Acetamidase |
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| Protein accession | XP_001384049 |
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| Protein GI | 150865006 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTTGAATGGG TATATACAGC TTGTTTGTGA AAAATGAAGT AACTTGCAAA TGTTCCCTGA
TTCACCAAGT CTCACTTCCT CGGTCTCACT CACCTACTAA TCGAGCTCCT ATTCATTTAG
TGGAGTAGCT ATTTAGGGAA TGTCGAAACG TTACACTTGT TGGGAACTGG GTACACCGGT
ACATGGATAA CGAATACCGA TATGACAATC ACCGATATCA ATCTCCCATA ACCACAAAGC
ACTACAGACA TTTACGAAAC GAAAGATTAG TGAAAATTCC GAGAGTCTAC GAGCGGAAAT
CAATATCGAA CTGAACAATA AACTCAATGC CCCCAAAAAC AGGAATTCTC CGCTGCAATT
ATTTCAAACT ACATGTGTCC ACTACAGAAA CTGTTCCTGT GACATGGTGC AATTGGTATC
TTTATATAGA CCAGACTGTT AGGAGTTCCA GTTCCGCTCG GGGTTACGCT ATCCTCTTCC
GATAAGCTCC TGCACTCCTT CCTGTAGCTG ATAAGATTGA TACAGTGGGG CCCCCGGATT
AGGCAATGGA CCGTTCTAGC TGATCGAGTA GCCATTCGTT TATAAGCACA AGGAAAGGCC
CGAGAAATAG TTTGGCTTTT GGAAAATTAC TACTATTAAT AGTTATATTG ATAACAAGCT
GACAGTGTTG TTCTTAAGGA CTACAGGCTA TTGCTCTTTG AGAACACGTA CAGCTCCTAC
AGACTAATTG CTATTCATTG CTTCTGCAGA TCGCCGATTT TCAATTTTCA GATCCGAAAA
TGACCATCAC CGCTCCAACC TACAAGGACA TTGCTGCTCG AAAAGTTGCC GAAAGGGATG
CCAAGTTCGC TACACATTGG TTAATTCCAG AAGACAAACT TCCCTCTGCT GACGTCAAAG
ATGTGCTCCA CTGGATTGCC AAGTCTGGCT ACTTGACTCC AGCTGAAATT GAGATTACTG
AGTCTCCGGT TGCTACTATT CTCGACAATA TCAAGTCTCG CAAATGGACA GCCGTAGATG
TCACTTCGGC TGTATGCCAT AGAGCATCTA TAGCCCACCA ATTGACCAAC TGCTTGACAG
AAATCTTTTT TGATGAAGCT TTGGAAAGAG CACTGGAGTT GGACAAATTC CAACAGGAAA
CTGGTCAAGT CGTAGGTCCT TTACATGGAT TGCCCATTTC GCTCAAGGAC AACTTCAACA
TCAAGGGACA GGCCACAACC ATCGGGATTG TGAATTTCTG CTTCAATCCT GAGAAATTTG
ACGAGGACGC TGTGTTGGTT AAGATGCTCC GAGCCCAAGG AGCAATTTTC TATGTCAAGA
CAAATGTACC TGTAGCCATG ATGATGCCTG AGTCCACCAA CCATATTTGG GGTAACACAA
CCAACCCTAT GAATAGGTCG TTGAGTTCTG GAGGCTCTTC TGGAGGCGAG GCTGCCTTAA
TCAAACTCCG AGGCTCTCCA ATTGGCATAG GCTCTGACAT TGGAGGCTCG ATTCGTATTC
CAGCTTCATT CCAGAACTTG TATGCTATCA AGCCGACGTT TGGAAGATTC CCTACTTACG
GTGCAAGATC AGGATTGCCG GGCCTAGAAT CTGTCAACAG TGTCAACGGA CCCTTGGGTA
CTTCATTAGA CGACTTGGAG TTCTATTGTA AAGCTGTCGT TGATAGTGAA CCTTGGAATC
ACGACGCAAA GTGTGTGGAA ATTCCATGGA GGGATATAGA ATTGCCAGAG AAGTTGAACA
TAGCCATCTG CATTGATGAC AAGTTCATCC GTCCTACTCC ACCAATTCGC AGAGCTGTCA
GGATCGTAGA AGAGTCGTTG AAAGCTGCTG GACATGATGT CATCGAATGG GTTCCTGAAG
ATCATTTGCG TCTCTCAGAA ATCATTCTGG CATTCTTTCT TAGTGATGGA GGTATTCATG
TCAAAGCTGA AACAGAAGCT ACAGGTGAAA CCATTTTTCC TTACATGAAA CCCTACGAGA
GCGCTGTAGA CATCTCAGTG TCTCAATTGT GGAAGCTACA TGCAGAAAGA ACTAAGCTCA
TTAAGAAGTA TCTCGACAGA TGGATGGCTA CGGCAGAAGT TACCAAGAAC GGCAAACCCA
TCGACGCCAT CATCATGCCA GTGACGCCTT TTGCGGGCAA CCCTAATGGA AAATTCCACA
ACTACGTAGG ATACACTTCT CCCTTCAACG TTTTAGACTA CACTGTAGGA GTTTTCCCCG
TGACTCGTGC TGATCAGGAA TTGGATCCAA GAGACGAGGA AAGCGCCAAC TACAATTCAG
AAGACAATGC TGTTTGGAGT GACTTCGATC CTAGTGCCAA CCATGGGGGA GCCGCTGCGT
TGCAGCTTAT TGGCAGGAAG TTCCAGGAGG AAAAGGTCAT TGCTATGATG AAGGTCATTT
CCGAGCTTAT CAACTATTCT GATTGA
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| Protein sequence | MTITAPTYKD IAARKVAERD AKFATHWLIP EDKLPSADVK DVLHWIAKSG YLTPAEIEIT
ESPVATILDN IKSRKWTAVD VTSAVCHRAS IAHQLTNCLT EIFFDEALER ASELDKFQQE
TGQVVGPLHG LPISLKDNFN IKGQATTIGI VNFCFNPEKF DEDAVLVKML RAQGAIFYVK
TNVPVAMMMP ESTNHIWGNT TNPMNRSLSS GGSSGGEAAL IKLRGSPIGI GSDIGGSIRI
PASFQNLYAI KPTFGRFPTY GARSGLPGLE SVNSVNGPLG TSLDDLEFYC KAVVDSEPWN
HDAKCVEIPW RDIELPEKLN IAICIDDKFI RPTPPIRRAV RIVEESLKAA GHDVIEWVPE
DHLRLSEIIS AFFLSDGGIH VKAETEATGE TIFPYMKPYE SAVDISVSQL WKLHAERTKL
IKKYLDRWMA TAEVTKNGKP IDAIIMPVTP FAGNPNGKFH NYVGYTSPFN VLDYTVGVFP
VTRADQELDP RDEESANYNS EDNAVWSDFD PSANHGGAAA LQLIGRKFQE EKVIAMMKVI
SELINYSD
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