Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_88102 |
Symbol | |
ID | 4837440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 1600459 |
End bp | 1601075 |
Gene Length | 617 bp |
Protein Length | 174 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640388755 |
Product | predicted protein |
Protein accession | XP_001383084 |
Protein GI | 150864317 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.806878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TACAATTACA ACTTCGATAA TTCTCTTCCA CTTATAGTGC AATTATACAA ATGTCATATA CCGAAATAAC GAAGCCAGAA ATTGTGGCTA CACCAAAATC TACAAAGAAG CCCTTGGTGC TCCCTCCAGG GTTTGGTCAG GATGGAAAAT CTGCTTCAGG TAAGACTAAG AAGGTTCTGT TCAAGAACGG TGATGAGCAG ATGGAGGAAT TGAAGGTAAA AAAGGCATGG GAGTTGGCAA CTGGTCCTGC TAAGTCCATA CCGATGAATG CCATCATGAG TTATATGACT GGTAACTCGT TACAGATCAT TCCAATGACT ATGACATTAA TGTTATTGTG GAACCCTTTG AAAGCCATTT TCACAGAAAC CAACGACACT TTCAAAGGTT TGATCACTAA GAAAAACTCG TCCAATATAT TATTGGCCAA ATTGGGATTT GTTTTCTTCC AGTTACTTAA CATGTCTATT GGGATCTACA AGTTATATAC CATGGGACTC ATTCCTAACA CAGAGGCAGA TTGGCTTGCC TGGAAAGAGT TGAAGTCTTT TGATGAAAGG TTGTCTTTTT ATTAGACTAT GTACGATGCC ATGCGATTCA TATATGTATA ATACAAC
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Protein sequence | MSYTEITKPE IVATPKSTKK PLVLPPGFGQ DGKSASGKTK KVSFKNGDEQ MEELKVKKAW ELATGPAKSI PMNAIMSYMT GNSLQIIPMT MTLMLLWNPL KAIFTETNDT FKGLITKKNS SNILLAKLGF VFFQLLNMSI GIYKLYTMGL IPNTEADWLA WKELKSFDER LSFY
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