11 homologs were found in PanDaTox collection
for query gene PICST_87922 on replicon NC_009042
Organism: Scheffersomyces stipitis CBS 6054



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009042  PICST_87922  ribosomal protein S24  100 
 
 
135 aa  271  2.0000000000000002e-72  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
BN001306  ANIA_09097  37S ribosomal protein S24 (AFU_orthologue; AFUA_7G02140)  73.39 
 
 
133 aa  184  3e-46  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.133794  normal  0.364425 
 
 
-
 
NC_009368  OSTLU_42986  Ribosomal protein S24, component of cytosolic 80S ribosome and 40S small subunit  60.33 
 
 
130 aa  142  1e-33  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.127832  normal  0.243183 
 
 
-
 
NC_011680  PHATRDRAFT_21323  predicted protein  54.92 
 
 
137 aa  131  3e-30  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_006686  CND04480  structural constituent of ribosome, putative  56.59 
 
 
172 aa  117  4.9999999999999996e-26  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.287785  n/a   
 
 
-
 
NC_013926  Aboo_0565  Ribosomal protein S24e  42.05 
 
 
99 aa  68.6  0.00000000003  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_009073  Pcal_0306  30S ribosomal protein S24e  32.91 
 
 
128 aa  47.4  0.00006  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_009376  Pars_1438  30S ribosomal protein S24e  31.65 
 
 
121 aa  44.3  0.0006  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.109359  normal  0.0262795 
 
 
-
 
NC_008698  Tpen_0448  ribosomal protein S24e  29.89 
 
 
106 aa  43.5  0.001  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_010525  Tneu_1197  30S ribosomal protein S24e  31.65 
 
 
135 aa  42.7  0.002  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
NC_008701  Pisl_1895  30S ribosomal protein S24e  29.11 
 
 
123 aa  41.2  0.005  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>