Gene PICST_87922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_87922 
SymbolRPS24 
ID4837255 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp572879 
End bp574010 
Gene Length1132 bp 
Protein Length135 aa 
Translation table12 
GC content39% 
IMG OID640388570 
Productribosomal protein S24 
Protein accessionXP_001382348 
Protein GI126131646 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2004] Ribosomal protein S24E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTTTGA CTAGTTGAAC CTACCAGAGA AATATCATCA AAATGGTATG TTATCACCAG 
CAGCAATCAG TGCTTGTAGT TGATGAGAGG AGTCCCCCTG ATAGACGAAT GTGAAGCGGC
AGAGACCCGT CAAGCTGTTC CTTAGAATCG TAGAAATCTT CGAAGAGACA CGAAATATCA
TTTCCAATGA CGACAGCGTA AAGCAATAGA AATCAACATG AAAATTGAGA ACTTGTCAAA
GGTTTACAAT CCAAAAAAGT GAATGCCATG AAATCCTCAA TAGATCCAGC CCAGCAGAGT
TCATCAGTTT GATATACGAT CATGATCGAG CTATAGTTTG CAAGAGGTCA AGACTAATCC
AACCGAAACT GTAGCACTAT AGAAATGACA ACACTATTTG TCTCTATTAA ATGACAAGAG
GAGTCTCTTT TATTAGCATG TCAGCGTTAT ATTCAACTTC GTGACCTTCA TCGAAAGTCG
ATCTTCAATA TTTTTGAATG AAGCTCGCTT TATACCAAAA GTTCCATCTA TCAAGGACAC
CTCCATTTAC GCATTACCCC TAAACATTAT ACTAACATTG TATCTAGAGT GACGCTGTTA
CCATCAGAAC TAGAAAGGTT ATCTCCAACC CATTGTTGGC CAGAAGACAA TTCGTCATTG
ACGTCTTGCA CCCAAACAGA GCTAACGTCT CCAAGGATGA ATTGAGAGAA AAGTTGGCTG
AAATCTACAA GGCTGAAAAG GATGCTGTTT CTGTTTTCGG TTTCAGAACC CAATTCGGTG
GTGGTAAGTC TACCGGTTTC GGTCTCATCT ACCAATCCGT TGCCGACGCC AAGAAGTTCG
AACCAGCCTA CAGATTAGTC AGATACGGTT TGGCTACCAA GGTCGAAAAG GCTTCCAGAC
AACAAAGAAA GCAAAAGAAG AACAGAGACA AGAAGATCTT TGGTACTCAA AAGCGTGCTG
CCAAGAGAGC CGCCAAGAGA AACGCCGATT AAACCGATTG AACGCTATAG CTGTTTATTC
ATTTTCACAA TTATGTTATA CTTTGTCCTT TAATATCTGT TAAATAGAAT AGTATATTTA
TATCGGTTTG TTGGGATGCA TCTTTTTAAT AAAAAAACCC TATGTGTATT AT
 
Protein sequence
MSDAVTIRTR KVISNPLLAR RQFVIDVLHP NRANVSKDEL REKLAEIYKA EKDAVSVFGF 
RTQFGGGKST GFGLIYQSVA DAKKFEPAYR LVRYGLATKV EKASRQQRKQ KKNRDKKIFG
TQKRAAKRAA KRNAD